| New model in OGS2.0 | DPOGS213128 |
|---|---|
| Genomic Position | scaffold889:- 17116-18933 |
| See gene structure | |
| CDS Length | 978 |
| Paired RNAseq reads | 1590 |
| Single RNAseq reads | 4911 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007889 (1e-176) |
| Best Drosophila hit | Trip1 (1e-132) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit I (9e-116) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit I [Bombyx mori] (0.0) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit I [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0006412 translation GO:0005852 eukaryotic translation initiation factor 3 complex GO:0005829 cytosol GO:0006413 translational initiation GO:0005875 microtubule associated complex |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL14662 |
Nucleotide sequence:
ATGCTGCAAGGGCATGAGCGTGCCATCACGCAAATCAAGTACAATCGCGAAGGAGATTTA
TTATTCTCTGCTGCCAAGGATTCGAAACCCAACGTGTGGTGGTCTTTGAATGGAGAGAGG
TTAGGCACTTTCAATGGTCACGGAGGAGTAGTATGGTGCCTTGACGTCGATTGGCAGACT
ATTAACCTCATCACCGGGGGTGGTGATAGTTCATGCAGGCTTTGGGATTTGGAAACTGGA
AAGAATATAGCAACCGTAAAAACCAATTCCTCTGTAAGAACATGCAACTTTAGCTTTAGT
GCATACCAGGCTGCATATACTACAGATAAGGCTATGGGTCATCCTTGCGAGGTGTTCATG
ATAGATACTAGGACCATTGATGACTCGCTTTCAACTCAATCTCCGATCCTGAAATGGGAA
ATCACAGACTCAAAAGTTACATCTATGGTCTGGGGAACCTTAGATGAAACCATTATCACA
GGTCATGAAGCCGGTGACCTTATCCAGTGGGATTTAAGGACTGGAAAGAAAGTGCACTCT
GTCAAAGAGCACACACACCAAATTAATGACATGCAGTTGTCTAGAGATGGAACCATGTTC
ATTACTGCTTCCAAGGATCAAACTGCTAAACTATTTGATACCTCCTCACTTGAACTGCTT
AAGGAATACAAAACTGAGCGTCCTGTCAACTCGGCAGCGCTTAGCCCTATCCTAGACCAT
GTAGTTCTTGGTGGAGGTCAAGATGCTATGGAAGTAACCACGACTTCTACCAGACAGGGC
AAGTTTGATGCTCGTTTCTTCCACCTTGTCTTTGAAGAAGAATTTGGCCGTGTAAAAGGT
CATTTCGGTCCCATCAACAGTTTGGCATTCCATCCCGATGGAAAAAGCTTTGCATCTGGT
GGTGAAGATGGTTATATTCGTGTACAGAGTTTTGATCAATCTTACTTTGATTATACTTTT
GATTACAACCGGGATTAA
Protein sequence:
MLQGHERAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVVWCLDVDWQT
INLITGGGDSSCRLWDLETGKNIATVKTNSSVRTCNFSFSAYQAAYTTDKAMGHPCEVFM
IDTRTIDDSLSTQSPILKWEITDSKVTSMVWGTLDETIITGHEAGDLIQWDLRTGKKVHS
VKEHTHQINDMQLSRDGTMFITASKDQTAKLFDTSSLELLKEYKTERPVNSAALSPILDH
VVLGGGQDAMEVTTTSTRQGKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPDGKSFASG
GEDGYIRVQSFDQSYFDYTFDYNRD