| New model in OGS2.0 | DPOGS204939 |
|---|---|
| Genomic Position | scaffold2923:+ 1131-7667 |
| See gene structure | |
| CDS Length | 363 |
| Paired RNAseq reads | 22 |
| Single RNAseq reads | 136 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005241 (4e-21) |
| Best Drosophila hit | CG33143, isoform C (7e-25) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to AGAP006721-PA [Tribolium castaneum] (9e-36) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP006721-PA [Tribolium castaneum] (6e-36) |
| GeneOntology terms | GO:0032963 collagen metabolic process GO:0005518 collagen binding GO:0005622 intracellular GO:0030198 extracellular matrix organization GO:0005576 extracellular region GO:0043206 fibril organization GO:0006631 fatty acid metabolic process GO:0006629 lipid metabolic process GO:0006644 phospholipid metabolic process GO:0006641 triglyceride metabolic process GO:0016337 cell-cell adhesion GO:0048251 elastic fiber assembly GO:0007160 cell-matrix adhesion GO:0043506 regulation of JUN kinase activity GO:0005583 fibrillar collagen GO:0005578 proteinaceous extracellular matrix GO:0005615 extracellular space GO:0008201 heparin binding GO:0030199 collagen fibril organization GO:0045785 positive regulation of cell adhesion |
| InterPro families | IPR003961 Fibronectin, type III IPR008957 Fibronectin type III domain IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL11876 |
Nucleotide sequence:
ATGCGGCGAGCGCCGCTCGCGCAGCCCGCCGCCGTCGCCATTGCAATATCCTTGCTATTA
CGCTTTGTTGACGCAGGTTCAATGGGCCCCGGAGTACCAGAGAATATAACTGTTACTTTC
CTAAATCCGACCACGGTGCGAGTATCCTGGTCTACAACAGCTGATCTAGTTGAGAAATAT
GACGTCACTTATAAACCCTCTGATGCCAGTTACAGAGTGGTACTAGAAGTAGCTGGTAAC
TCTGACGCAGTGATACTTAGCGGACTGGAAGCAGACACGCAATATCAAGTAACAGTCGCC
GCCTTGTGGGGCGGACACAAGTATAGAAGCAGGCCTATAGTCTTCCGCACGCTGGGTAAG
TAA
Protein sequence:
MRRAPLAQPAAVAIAISLLLRFVDAGSMGPGVPENITVTFLNPTTVRVSWSTTADLVEKY
DVTYKPSDASYRVVLEVAGNSDAVILSGLEADTQYQVTVAALWGGHKYRSRPIVFRTLGK