DPOGS204939 | ||
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Transcript | DPOGS204939-TA | 696 bp |
Protein | DPOGS204939-PA | 231 aa |
Genomic position | DPSCF300160 + 27420-49448 | |
RNAseq coverage | 97x (Rank: top 61%) |
Annotation | ||||
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Heliconius | HMEL003636 | 1e-11 | 100.00% |   |
Bombyx | BGIBMGA005241-TA | 7e-28 | 82.86% |   |
Drosophila | CG33143-PB | 5e-38 | 47.28% |   |
EBI UniRef50 | UniRef50_E2BC69 | 6e-58 | 65.35% | Putative uncharacterized protein n=6 Tax=Formicidae RepID=E2BC69_HARSA |
NCBI RefSeq | XP_001688154.1 | 2e-63 | 62.84% | AGAP006721-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|380014006 | 3e-63 | 64.71% | PREDICTED: uncharacterized protein LOC100869536 [Apis florea] |
NCBI nr blastx | gi|91091040 | 9e-69 | 65.49% | PREDICTED: similar to AGAP006721-PA [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005515 | 3e-12 | protein binding | |
KEGG pathway |   | |||
InterPro domain | [30-130] IPR008957 | 1e-15 | Fibronectin type III domain | |
[30-124] IPR013783 | 6.9e-14 | Immunoglobulin-like fold | ||
[33-102] IPR003961 | 3e-12 | Fibronectin, type III | ||
Orthology group | MCL15792 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204939-TA
ATGCGGCGAGCGCCGCTCGCGCAGCCCGCCGCCGTCGCCATTGCAATATCCTTGCTATTACGCTTTGTTGACGCAGGTTCAATGGGCCCCGGAGTACCAGAGAATATAACTGTTACTTTCCTAAATCCGACCACGGTGCGAGTATCCTGGTCTACAACAGCTGATCTAGTTGAGAAATATGACGTCACTTATAAACCCTCTGATGCCAGAGTGGTACTAGAAGTAGCTGGTAACTCTGACGCAGTGATACTTAGCGGACTGGAAGCAGACACGCAATATCAAGTAACAGTCGCCGCCTTGTGGGGCGGACACAAGTATAGAAGCAGGCCTATAGTCTTCCGCACGCTGGAGCTCCCTCGAACGTCACCGCAACAGGACGGGGGTCTAGAGTCAGCTCGCTCCTCAGTGACCCCCCCCGATCCTTCGCCAACATTTCCAACGATACGAGGCGTGGAAATTGGGATCGTAGTTTTAATACTGATAGTATGGATCGGAGCTATAGCTCTATTCTTCAATAGATGGGGGAAGATTCGAATGTTGCTGCCATACCAACCCGACTACAAGCAGGAGCAGCTGAAGGTGCCCGGAAGCAGCGCTTTGGCTGCAGCAACGGCAGGCGGAACCTGTGGTGCTCATTCAGCACCGTCAGCATGTTCGCACCAAATAGCTGATAGTTTCGCTTACACAACCACATAA
>DPOGS204939-PA
MRRAPLAQPAAVAIAISLLLRFVDAGSMGPGVPENITVTFLNPTTVRVSWSTTADLVEKYDVTYKPSDARVVLEVAGNSDAVILSGLEADTQYQVTVAALWGGHKYRSRPIVFRTLELPRTSPQQDGGLESARSSVTPPDPSPTFPTIRGVEIGIVVLILIVWIGAIALFFNRWGKIRMLLPYQPDYKQEQLKVPGSSALAAATAGGTCGAHSAPSACSHQIADSFAYTTT-