| New model in OGS2.0 | DPOGS211799 |
|---|---|
| Genomic Position | scaffold306:+ 9621-11388 |
| See gene structure | |
| CDS Length | 504 |
| Paired RNAseq reads | 289 |
| Single RNAseq reads | 1441 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | dynein light intermediate chain, isoform C (3e-16) |
| Best Human hit | cytoplasmic dynein 1 light intermediate chain 2 (1e-08) |
| Best NR hit (blastp) | PREDICTED: similar to dynein light intermediate chain [Tribolium castaneum] (2e-39) |
| Best NR hit (blastx) | PREDICTED: similar to dynein light intermediate chain [Tribolium castaneum] (5e-25) |
| GeneOntology terms | GO:0003774 motor activity GO:0005868 cytoplasmic dynein complex GO:0005875 microtubule associated complex GO:0030286 dynein complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled GO:0048813 dendrite morphogenesis GO:0007052 mitotic spindle organization GO:0008088 axon cargo transport GO:0048814 regulation of dendrite morphogenesis GO:0000226 microtubule cytoskeleton organization GO:0048477 oogenesis |
| InterPro families | IPR022780 Dynein family light intermediate chain IPR008467 Dynein 1 light intermediate chain |
| Orthology group | ND |
Nucleotide sequence:
ATGGAGACTAATTCGTCTGTACCGGCGGGTTGGGACAGCATGAAGAAGATCAGTATCCTG
TACGAGAACATGCAGACGTGCCAGCCCGACGACTACTACAGAGACGCGATCGTTCAACCC
GCTACCAGGAAGAGCGGCACTCGTTGTGAGGCGGAGGTGCAGGCTGAGGACGAGCAGGCA
TTCCTCCAGCGGCAGTTGGCGGCGCTGCAGGCCGGCGCTCCCGCCCCCAGGGCTGACTCC
CCGCTCAGGACCGCGCAGAGGGTCACGCCACAGTTGGACGGCGCCAAGATCGGCATGGGC
ACCGGCACTCCGGGCAACGAGGGCGTCCTGGCCAACTTCTTCAACTCGCTGTTATACAAG
AAGACGGGGTCGCCGGGGGCGCGCGCCCCGGACGCCTCGCCCGCAGCCGCCGCCGCCCGC
TCGGACGCCGCGGCAGAGCTCGACAGACTCACGCGCGCCAAGAGACCTCCGCCGCCCATA
GACCTCAACTCCTCCGACTGCTAG
Protein sequence:
METNSSVPAGWDSMKKISILYENMQTCQPDDYYRDAIVQPATRKSGTRCEAEVQAEDEQA
FLQRQLAALQAGAPAPRADSPLRTAQRVTPQLDGAKIGMGTGTPGNEGVLANFFNSLLYK
KTGSPGARAPDASPAAAAARSDAAAELDRLTRAKRPPPPIDLNSSDC