| New model in OGS2.0 | DPOGS200700 |
|---|---|
| Genomic Position | scaffold4124:- 4078-6720 |
| See gene structure | |
| CDS Length | 1005 |
| Paired RNAseq reads | 421 |
| Single RNAseq reads | 1073 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005282 (1e-82) |
| Best Drosophila hit | spliceosomal protein on the X (6e-109) |
| Best Human hit | splicing factor 3B subunit 4 (4e-106) |
| Best NR hit (blastp) | spliceosomal protein on the X [Bombyx mori] (1e-128) |
| Best NR hit (blastx) | spliceosomal protein on the X [Bombyx mori] (5e-118) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL14827 |
Nucleotide sequence:
ATGGCTGCAGGACCAATTGCAGAAAGAAATCAAGATGCAACGATTTACGTTGGTGGTTTG
GACGACAGAGTCACAGAAAGCCTGCTTTGGGAACTATTTGTTCAAGCTGGACCTGTCGTG
AATGTTCATATGCCAAAGGACCGAGTGACACAAACTCATCAAGGATATGGATTTGTTGAA
TTTATGGGAGAAGAAGATGCCGATTATGCAATAAAGGTCATGAATATGATAAAACTATAT
GGAAAGCCCGTAAGGGTAAATAAAGCATCAGCACACCAGAAGAACCTTGATGTGGGAGCT
AATGTGTTCATTGGTAATCTTGATCCCGAGGTAGATGAAAAACTATTGTATGATACATTT
TCTGCATTCGGTGTCATATTGCAGACGCCTAAGGTTATGAGAGACCCCGAGACTGGTAAC
TCGAAAGCATTTGCATTTATAAACTTTGCATCCTTCGAAGCCTCCGATGCGGCCATAGAG
GCTATGAATAACCAGTACTTGTGCAACCGTCCTATATCTGTCTCTTATGCATTTAAGAAA
GATGTTAAGGGAGAAAGGCATGGTTCCGCAGCTGAAAGGTTACTGGCAGCACAAAATCCT
TTATCGCATGCAGACAGACCTCACCAGCTGTTTGCAGATGCGCCACCTATAATGGGTCCA
CTGCTGATGGCTCCTCCTCCACCACCGACGCCAAGTCCGATGCCGCCTGGCCCTCCGTTG
ACATCACGACCTCCATTGCCAATGGCTGCTCCCCCACCACCACCCTCAACAATGCCTCCA
CCTGGGCCACCTCCACCCCCAGGGCCCCCACCCCCTCCGCCGCCATTTCATCATTTCCCC
CCTCCTCCATTCGGGCCACCTGGCTTTGGCCCGCCACCCCCTCCTGGAGCGAGGCCCCCA
CCATGGAGGCCACCCCCACCGTCTTTCAGGCCCCAATACCGACCGCCACCGTTTGGTCAT
CCCCCCTTCCCGCACCACCCGCCTGAACCAAACTATAACTATTAA
Protein sequence:
MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVE
FMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTF
SAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKK
DVKGERHGSAAERLLAAQNPLSHADRPHQLFADAPPIMGPLLMAPPPPPTPSPMPPGPPL
TSRPPLPMAAPPPPPSTMPPPGPPPPPGPPPPPPPFHHFPPPPFGPPGFGPPPPPGARPP
PWRPPPPSFRPQYRPPPFGHPPFPHHPPEPNYNY