| New model in OGS2.0 | DPOGS202506 |
|---|---|
| Genomic Position | scaffold563:- 99548-105485 |
| See gene structure | |
| CDS Length | 1971 |
| Paired RNAseq reads | 545 |
| Single RNAseq reads | 1423 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001426 (0.0) |
| Best Drosophila hit | CG5987 (1e-130) |
| Best Human hit | tubulin polyglutamylase TTLL6 isoform 1 (4e-134) |
| Best NR hit (blastp) | PREDICTED: similar to tubulin tyrosine ligase-like family, member 6 [Tribolium castaneum] (4e-172) |
| Best NR hit (blastx) | PREDICTED: similar to tubulin tyrosine ligase-like family, member 6 [Tribolium castaneum] (4e-160) |
| GeneOntology terms | GO:0004835 tubulin-tyrosine ligase activity GO:0006464 protein modification process GO:0042995 cell projection GO:0005929 cilium GO:0016874 ligase activity GO:0005737 cytoplasm GO:0030030 cell projection organization GO:0005856 cytoskeleton GO:0035083 cilium axoneme assembly |
| InterPro families | IPR004344 Tubulin-tyrosine ligase |
| Orthology group | MCL12785 |
Nucleotide sequence:
ATGGCGCAGTTAGATTTGCATGACACTTTCTTAAACGATGAAGACCACCTGCATATTACA
AAACAAACAGGAACATTATCCAAAAGAAAAACTGATAAAGAAGAGAAAATATCGCCAGAA
CATTTAGTTAAAGAGGATATGGCAGACAAAATTGCAACAATTCTTATGCACAACTATGAT
GGCAAATTGTATGGAGAAGATGATACATCTCAGCCAACTTCATGTACTGCACCAATTATA
CCTATTGAAGCTACACGTAAAAAAAAGAAAAGGAAGAGATCTCAGATATCAATATGCCTA
ACAAACTGTCGTTATGAGTCGATCCGTAAGGTGGCAAGTGCATTTGGTATGAGAGAGGTC
TCTGAAGAGGAGGCTTGGAACTTTTACTGGACTGATATGAGCGTGTCTGTGGAACGAGCC
AAGGAGATGAAGCGGTTCCAGAGGATAAATCACTTCCCCGGCATGCTTGAGATATGCAGA
AAGGATTTGTTGGCAAGAAACTTAAACAGAATGCAAAAAATATATCCCAAAGAGTATAAC
TTCTTTCCAAAGACCTGGTGCCTGCCTGCCGATTTTGGCGAGGCACTAAACTATAGTAAA
TCTAGAAAGAACAAGACGTTCATAATAAAGCCGGAGTGCGGGAGTCAGGGGCGAGGCATC
TACCTCACGAAGTCACTTAAGGACATCAAGCCGACGGATAAATTAATTTGTCAGGTGTAC
TTATCAAAGCCGTACTTAGTGGACGGTTACAAGTTTGATATCAGAGTGTACACTCTCATA
ACGTCCTGCGACCCTCTACGGATATTCGTCTACAACGAGGGTCTTGTGAGATTCGCGACC
AGCCGCTACGCGGATCCCAATGTGAACAACACTACGAACGTGTTCATGCATCTGACGAAC
TACGCCCTCAACAAACACAGTCGCACATATGTCTATGACTCGGAGGCTGGCAGCAAACGC
AAGATATCAACTTTGAACAAGATCCTGCTGTCGCAAGGAGTGGATTTGGACCGTCTGTGG
CACTCCATCGACCAAGTTATAGTGAAGACTATTATATCAGCGTGGCCCATACTGAAACAC
AGCTACCACGCTTGCTTCCCCTCGCATGATATGGTACATGCCTGCTTCGAAATATTGGGC
TTCGACATTTTACTGGATCACAAGCTCCATCCTTTCATTCTAGAAGTGAACCATTCGCCA
AGTTTCCACACAGACACACAGTTGGATCGTGAAGTGAAAGAGGGACTGCTGACGGACACA
CTCACCATGCTAAATATATGGCAATGTGACAAGAAGAGAGTCCTGGAGGAAGATCGCAAG
AGAATACGAGACAGACTGCTGCAGACAAACAAGTTTGCGGAATACGCTCCGACAGAGGAA
AAAGAGCCGGAGAAGAGTCCCTGGCAGACTCAGATACAGTGGGAAGAGACACATCTCGGT
AACTTCCGACGCGTGTATCCTGTGGGCGAGCAGTACGCCAGTCTGTTCCAACAGCCCTCG
GGTTCATTATACACGGGCACGGCCTCCTCACGGGCGAGGGGAGATTGCGCACGGTTACAG
AGAGAGGAATTCCAGCAAACGAAAGCAAAAGCAGAAGCTCTAAAGAAACCTTCGCAACCC
AAGACCAAAGAAGACGATCAGAAACCTAAAGAAAAGAAAGAGAAGGAAAAGGAGGGAGAA
GGTGGTAGTATGAGCATCAGCGTTACAACTGACAAGGGTAAGGTTAAAGTTAAGGAACAA
AAGAAGAAGGAAGATAAGCCGAAAGTCGCTTCCAAACCGTCCTTGATGCAACAAACAGTT
TCACCTACAGAGGAAAAAGAGAAGGAGCCGAAGCCGTCTTACGTGACGTGTTCGTATGAG
CCGGACGCTATCGTTGAGAGAGAAGAAAGAGAAAGGCTCAATCTATTGGCTCAGAGGGAC
TTCCTCATACGCAGCTATGGGATCAACCTTGTCCATAATCTTGTCTTGTAA
Protein sequence:
MAQLDLHDTFLNDEDHLHITKQTGTLSKRKTDKEEKISPEHLVKEDMADKIATILMHNYD
GKLYGEDDTSQPTSCTAPIIPIEATRKKKKRKRSQISICLTNCRYESIRKVASAFGMREV
SEEEAWNFYWTDMSVSVERAKEMKRFQRINHFPGMLEICRKDLLARNLNRMQKIYPKEYN
FFPKTWCLPADFGEALNYSKSRKNKTFIIKPECGSQGRGIYLTKSLKDIKPTDKLICQVY
LSKPYLVDGYKFDIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNVNNTTNVFMHLTN
YALNKHSRTYVYDSEAGSKRKISTLNKILLSQGVDLDRLWHSIDQVIVKTIISAWPILKH
SYHACFPSHDMVHACFEILGFDILLDHKLHPFILEVNHSPSFHTDTQLDREVKEGLLTDT
LTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKFAEYAPTEEKEPEKSPWQTQIQWEETHLG
NFRRVYPVGEQYASLFQQPSGSLYTGTASSRARGDCARLQREEFQQTKAKAEALKKPSQP
KTKEDDQKPKEKKEKEKEGEGGSMSISVTTDKGKVKVKEQKKKEDKPKVASKPSLMQQTV
SPTEEKEKEPKPSYVTCSYEPDAIVEREERERLNLLAQRDFLIRSYGINLVHNLVL