| New model in OGS2.0 | DPOGS212357 |
|---|---|
| Genomic Position | scaffold101:+ 6867-7784 |
| See gene structure | |
| CDS Length | 918 |
| Paired RNAseq reads | 1163 |
| Single RNAseq reads | 3243 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012007 (7e-113) |
| Best Drosophila hit | TBPH, isoform F (8e-82) |
| Best Human hit | TAR DNA-binding protein 43 (6e-69) |
| Best NR hit (blastp) | TAR DNA binding protein homolog [Bombyx mori] (1e-126) |
| Best NR hit (blastx) | TAR DNA binding protein homolog [Bombyx mori] (5e-118) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0008344 adult locomotory behavior GO:0007528 neuromuscular junction development |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12704 |
Nucleotide sequence:
ATGTCGATAGAGTACGTGGTGGTGAGCGAGGGCGAACAAGACGAGCCCATCGAACTGCCC
ACCGAGGAAGACGGTTCTCTACTTCTGAGCACAATATCCGCTCAATTCGTGGGCGCTAGC
GGCCTGAAATATCGTGCTGGAGGTCGACTTCGTGGACTTCGTCTGACTGAGGATCGAGTG
CTGCCGCCAGCTGAAGGCTGGGGAGCACATCGTTATTTTTGCGCCTTTCCACGTGTGGAT
ATACCAACCGCTACAACAAGGCCACGTTGCTCTGACCTCATAGTACTTGGTCTGCCTTGG
AAAACTGGTGAAGAAACAGTTCGAGAGTATTTTTCTACATTCGGTGATTTGTTAATGGTA
CAAGTAAAACGGGATACAAAGACGGGGTTATCTAAAGGTTTTGGTTTTATTAAGTTTGCT
GAATATGACGCCCAGCTTCGTGCTCTGGGTAGGCGGCATATGATCGATGGGCGCTGGTGT
GACGTTCGTATTCCTAACAGTAAGGATGGCAGTTCTGCAGCGCACCGAAAAGTCTTTGTG
GGTCGTTGCACCGAAAGCCTCACAGCTGATGATCTACGTGAATACTTTGGTGCATTTGGA
CAGGTGACAGATGTCTTTGTACCCAAACCATTTCGGGCATTCAGTTTTGTAACATTTCTA
GATCCAGAAGTAGCTCAGTCCCTGTGTGGCCAGGACCATGTCATCAAAGGTGTGTCTGTC
AACATTTCAACTGCCTCCCCTAAGAGAGAACACAGTGGCCGTTCTCAGTTGTTGGGCTGG
AGTTTGCTGGAGGGTGCGGCGCCACGTGTTTACAGCTGGCCTCCTGATGCTTGGCAGCAT
TCGGCACACTCGGCCCACTCTGCACATTCACACTCTACGGCACCACCTGATGCTAAGCCC
TACCTCAAATATGAGTGA
Protein sequence:
MSIEYVVVSEGEQDEPIELPTEEDGSLLLSTISAQFVGASGLKYRAGGRLRGLRLTEDRV
LPPAEGWGAHRYFCAFPRVDIPTATTRPRCSDLIVLGLPWKTGEETVREYFSTFGDLLMV
QVKRDTKTGLSKGFGFIKFAEYDAQLRALGRRHMIDGRWCDVRIPNSKDGSSAAHRKVFV
GRCTESLTADDLREYFGAFGQVTDVFVPKPFRAFSFVTFLDPEVAQSLCGQDHVIKGVSV
NISTASPKREHSGRSQLLGWSLLEGAAPRVYSWPPDAWQHSAHSAHSAHSHSTAPPDAKP
YLKYE