DPGLEAN10381 in OGS1.0

New model in OGS2.0DPOGS202402 
Genomic Positionscaffold1477:- 57599-59030
See gene structure
CDS Length1353
Paired RNAseq reads  3176
Single RNAseq reads  7461
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA004603 (0.0)
Best Drosophila hit  beta-Tubulin at 56D, isoform B (0.0)
Best Human hittubulin beta-2C chain (0.0)
Best NR hit (blastp)  beta-tubulin [Halocynthia roretzi] (0.0)
Best NR hit (blastx)  beta-tubulin [Halocynthia roretzi] (0.0)
GeneOntology terms








  
GO:0007017 microtubule-based process
GO:0005874 microtubule
GO:0000166 nucleotide binding
GO:0043234 protein complex
GO:0051258 protein polymerization
GO:0045298 tubulin complex
GO:0007018 microtubule-based movement
GO:0003924 GTPase activity
GO:0005198 structural molecule activity
GO:0005525 GTP binding
InterPro families






  
IPR000217 Tubulin
IPR017975 Tubulin, conserved site
IPR013838 Beta tubulin, autoregulation binding site
IPR003008 Tubulin/FtsZ, GTPase domain
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR023123 Tubulin, C-terminal
IPR008280 Tubulin/FtsZ, C-terminal
IPR002453 Beta tubulin
Orthology groupMCL10040

Nucleotide sequence:

ATGAGGGAGATCGTCCACATCCAGGTCGGGCGGTGCGGAAATCAAATAGGATCGAAGTTC
TGGGAGGTGATATCGGATGAACATGGCATAGATCCAAGTGGTTGCTACGCCGGAGATTCT
GATCTACAACTCGAACGCATCAACGTGTATTACAACGAAGCGGCAGCCGGTAAATACGTG
CCGCGAGCTGTTCTTGTTGATCTCGAACCCGGGACGATGGATTCGTTACGCGCTGGGCCA
TACGGTCAAATATTTCGTCCCGATAACATAGTTTTTGGTGTATCGGGAGCTGGTAATAAT
TGGGCTAAAGGACATTATACAGAAGGAGCGGACTTGCTCGAGTCGGTCTTGGATGTTATT
AGGAAGGAAGCTGAAGGTTGTGACTGTCTTCAAGGTTTCGAACTGATTCACTCGTTGGGA
GGCGGTACTGGCTCAGGTTTAGGAACCTTGTTGCTGAATAATTTAAGGGAAGAGTATGCA
GATAGAATTATTTTAACGTTTTCCGTCGTCCCGAGCCCTAAAGTTTCTGATACCGTCGTA
GAGCCGTATAATGCCACGTTATCATTAAACCAGCTCATAGAAAATTCCGATCAATCATTT
TGTATAGACAACGAAGCTTTGTACGATATTTGTTTCCGAACGTTGCGACTGCAAACACCC
ACATACGGTGACTTGAACCATTTGGTGTCGGCGACGATGTCTGGTGTCACGACGTGCCTG
CGGTTTCCCGGACAATTAAATGCGGACCTTCGAAAGCTTGCAGTCAATATGGTGCCGTTC
CCGAGGCTACACTTCTTCATGCCGGGATTCGCTCCGCTCACAGCCAGGGGCAGTCAGCAG
TACAGAGCATTGACCGTACCTGAGCTCACTCTCCAGATGTTCGACGCCAAGAACATGATG
GCAGCATGCGATCCACGTCACGGACGATATCTCACCGTGGCGGCTGTGTTCCGCGGTCGG
ATGTCAATGAAAGAAGTCGACGAGCAAATGCTTAATATACAGAACAAAAATAAAGACTAC
TTTGTGAAATGGATACCCAATAACGTTAAGACCGCCGTGTGTGACATCCCACCCCGTGGA
TTGAAAATGTCTGCAACTTTTATTGGCAATACGACCGCCATACAAGAGATTCTCAAAAGA
GTGTCTGAACAATTCGCCTCCATGTTTCGAAGGAAAGCATTCATACACTGGTACACCGGC
GAGGGTATGGACGAAACTGACTTCACCGAGGCAGACAATAACCTCAGCGATCTTATATCA
GAATATCAACAGTACCAAGATGCGACAACAGAAGAACAAGAATTCGAGGAAGAGGAGGAC
GAAGCTGCACCAAATGAAGAGAGTGACCAATAA

Protein sequence:

MREIVHIQVGRCGNQIGSKFWEVISDEHGIDPSGCYAGDSDLQLERINVYYNEAAAGKYV
PRAVLVDLEPGTMDSLRAGPYGQIFRPDNIVFGVSGAGNNWAKGHYTEGADLLESVLDVI
RKEAEGCDCLQGFELIHSLGGGTGSGLGTLLLNNLREEYADRIILTFSVVPSPKVSDTVV
EPYNATLSLNQLIENSDQSFCIDNEALYDICFRTLRLQTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTLQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNKDYFVKWIPNNVKTAVCDIPPRG
LKMSATFIGNTTAIQEILKRVSEQFASMFRRKAFIHWYTGEGMDETDFTEADNNLSDLIS
EYQQYQDATTEEQEFEEEEDEAAPNEESDQ