New model in OGS2.0 | DPOGS202402  |
---|---|
Genomic Position | scaffold1477:- 57599-59030 |
See gene structure | |
CDS Length | 1353 |
Paired RNAseq reads   | 3176 |
Single RNAseq reads   | 7461 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004603 (0.0) |
Best Drosophila hit   | beta-Tubulin at 56D, isoform B (0.0) |
Best Human hit | tubulin beta-2C chain (0.0) |
Best NR hit (blastp)   | beta-tubulin [Halocynthia roretzi] (0.0) |
Best NR hit (blastx)   | beta-tubulin [Halocynthia roretzi] (0.0) |
GeneOntology terms    | GO:0007017 microtubule-based process GO:0005874 microtubule GO:0000166 nucleotide binding GO:0043234 protein complex GO:0051258 protein polymerization GO:0045298 tubulin complex GO:0007018 microtubule-based movement GO:0003924 GTPase activity GO:0005198 structural molecule activity GO:0005525 GTP binding |
InterPro families    | IPR000217 Tubulin IPR017975 Tubulin, conserved site IPR013838 Beta tubulin, autoregulation binding site IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR023123 Tubulin, C-terminal IPR008280 Tubulin/FtsZ, C-terminal IPR002453 Beta tubulin |
Orthology group | MCL10040 |
Nucleotide sequence:
ATGAGGGAGATCGTCCACATCCAGGTCGGGCGGTGCGGAAATCAAATAGGATCGAAGTTC
TGGGAGGTGATATCGGATGAACATGGCATAGATCCAAGTGGTTGCTACGCCGGAGATTCT
GATCTACAACTCGAACGCATCAACGTGTATTACAACGAAGCGGCAGCCGGTAAATACGTG
CCGCGAGCTGTTCTTGTTGATCTCGAACCCGGGACGATGGATTCGTTACGCGCTGGGCCA
TACGGTCAAATATTTCGTCCCGATAACATAGTTTTTGGTGTATCGGGAGCTGGTAATAAT
TGGGCTAAAGGACATTATACAGAAGGAGCGGACTTGCTCGAGTCGGTCTTGGATGTTATT
AGGAAGGAAGCTGAAGGTTGTGACTGTCTTCAAGGTTTCGAACTGATTCACTCGTTGGGA
GGCGGTACTGGCTCAGGTTTAGGAACCTTGTTGCTGAATAATTTAAGGGAAGAGTATGCA
GATAGAATTATTTTAACGTTTTCCGTCGTCCCGAGCCCTAAAGTTTCTGATACCGTCGTA
GAGCCGTATAATGCCACGTTATCATTAAACCAGCTCATAGAAAATTCCGATCAATCATTT
TGTATAGACAACGAAGCTTTGTACGATATTTGTTTCCGAACGTTGCGACTGCAAACACCC
ACATACGGTGACTTGAACCATTTGGTGTCGGCGACGATGTCTGGTGTCACGACGTGCCTG
CGGTTTCCCGGACAATTAAATGCGGACCTTCGAAAGCTTGCAGTCAATATGGTGCCGTTC
CCGAGGCTACACTTCTTCATGCCGGGATTCGCTCCGCTCACAGCCAGGGGCAGTCAGCAG
TACAGAGCATTGACCGTACCTGAGCTCACTCTCCAGATGTTCGACGCCAAGAACATGATG
GCAGCATGCGATCCACGTCACGGACGATATCTCACCGTGGCGGCTGTGTTCCGCGGTCGG
ATGTCAATGAAAGAAGTCGACGAGCAAATGCTTAATATACAGAACAAAAATAAAGACTAC
TTTGTGAAATGGATACCCAATAACGTTAAGACCGCCGTGTGTGACATCCCACCCCGTGGA
TTGAAAATGTCTGCAACTTTTATTGGCAATACGACCGCCATACAAGAGATTCTCAAAAGA
GTGTCTGAACAATTCGCCTCCATGTTTCGAAGGAAAGCATTCATACACTGGTACACCGGC
GAGGGTATGGACGAAACTGACTTCACCGAGGCAGACAATAACCTCAGCGATCTTATATCA
GAATATCAACAGTACCAAGATGCGACAACAGAAGAACAAGAATTCGAGGAAGAGGAGGAC
GAAGCTGCACCAAATGAAGAGAGTGACCAATAA
Protein sequence:
MREIVHIQVGRCGNQIGSKFWEVISDEHGIDPSGCYAGDSDLQLERINVYYNEAAAGKYV
PRAVLVDLEPGTMDSLRAGPYGQIFRPDNIVFGVSGAGNNWAKGHYTEGADLLESVLDVI
RKEAEGCDCLQGFELIHSLGGGTGSGLGTLLLNNLREEYADRIILTFSVVPSPKVSDTVV
EPYNATLSLNQLIENSDQSFCIDNEALYDICFRTLRLQTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTLQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNKDYFVKWIPNNVKTAVCDIPPRG
LKMSATFIGNTTAIQEILKRVSEQFASMFRRKAFIHWYTGEGMDETDFTEADNNLSDLIS
EYQQYQDATTEEQEFEEEEDEAAPNEESDQ