| New model in OGS2.0 | DPOGS202403 |
|---|---|
| Genomic Position | scaffold1477:- 55352-56767 |
| See gene structure | |
| CDS Length | 1329 |
| Paired RNAseq reads | 3468 |
| Single RNAseq reads | 9113 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004603 (0.0) |
| Best Drosophila hit | beta-Tubulin at 56D, isoform B (0.0) |
| Best Human hit | tubulin beta-2C chain (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to beta1-tubulin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein LOC379202 [Xenopus laevis] (0.0) |
| GeneOntology terms | GO:0043234 protein complex GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0005525 GTP binding GO:0005874 microtubule GO:0007017 microtubule-based process GO:0003924 GTPase activity GO:0007018 microtubule-based movement GO:0000166 nucleotide binding |
| InterPro families | IPR000217 Tubulin IPR017975 Tubulin, conserved site IPR013838 Beta tubulin, autoregulation binding site IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR023123 Tubulin, C-terminal IPR008280 Tubulin/FtsZ, C-terminal IPR002453 Beta tubulin |
| Orthology group | MCL10040 |
Nucleotide sequence:
ATGAGGGAAATCGTCCACATCCAAGCCGGGCAATGCGGCAACCAAATTGGGGCTAAGTTT
TGGGAAGTAATATCAGACGAACACGGTATTGACCCTACAGGAGCTTACCAGGGTGACTCC
GACCTGCAATTGGAGCGCATTAATGTATATTACAATGAGGCTTCCGGCTGCAAATACGTA
CCGAGAGCCGTTCTCGTCGACCTTGAGCCTGGCACTATGGATTCTGTAAGGTCCGGACCA
TTCGGGCAGATATTTCGCCCGGACAATTTTGTTTTCGGGCAATCTGGTGCCGGTAACAAT
TGGGCGAAAGGACACTATACGGAGGGAGCCGAGTTGGTGGATTCGGTTCTCGATGTAGTC
AGAAAGGAAGCAGAGGGTTGTGACTGTCTGCAAGGATTCCAGTTGACGCATTCTCTTGGT
GGTGGTACTGGCTCGGGGATGGGTACTTTGTTGATATCAAAAATAAGAGAAGAATACCCC
GACCGGATCATGAATACCTTTTCGGTTGTACCCAGTCCAAAAGTGTCGGACACTGTAGTC
GAACCTTACAATGCTACTTTATCTGTCCACCAATTAGTGGAAAATACGGATGAAACTTAC
TGCATCGATAATGAAGCGTTATATGATATTTGTTTCCGCACTCTTAAATTGACTACCCCT
ACCTACGGTGACTTGAATCACTTGGTGTCAGCGACGATGTCTGGTGTCACAACCTGTCTA
CGTTTTCCCGGCCAACTAAACGCTGATCTCCGTAAACTTGCTGTCAACATGGTTCCATTT
CCGCGATTACATTTTTTCATGCCAGGTTTCGCACCGCTCACATCAAGAGGCAGTCAACAA
TATAGAGCACTCACTGTACCAGAACTTACTCAGCAAATGTTCGACGCTAAGAACATGATG
GCGGCGTGTGATCCTCGCCATGGGCGATATCTGACTGTGGCTGCTGTATTCCGTGGCCGC
ATGTCCATGAAGGAAGTGGACGAGCAGATGTTAAATATACAAAATAAAAACAGCAGCTAC
TTCGTTGAATGGATTCCGAATAACGTAAAGACGGCCGTTTGCGATATTCCACCTCGTGGA
CTCAAGATGTCCGCCACATTTATCGGTAATACAACAGCTATACAGGAGTTGTTCAAGAGA
ATATCTGAACAATTTTCAGCCATGTTTAGACGAAAAGCTTTTTTGCATTGGTACACTGGC
GAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGTAATATGAATGACCTGGTGTCT
GAGTACCAGCAGTATCAAGATGCAACGGTCGATGATGAAGGGGAATTTGACGAGGAAGTG
GAAGAATAG
Protein sequence:
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYQGDSDLQLERINVYYNEASGCKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVDDEGEFDEEVEE