| New model in OGS2.0 | DPOGS211500 |
|---|---|
| Genomic Position | scaffold1813:- 396-18675 |
| See gene structure | |
| CDS Length | 3420 |
| Paired RNAseq reads | 1971 |
| Single RNAseq reads | 5264 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003806 (3e-38) |
| Best Drosophila hit | glued (1e-82) |
| Best Human hit | dynactin subunit 1 isoform 1 (3e-49) |
| Best NR hit (blastp) | dynactin [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to dynactin [Nasonia vitripennis] (6e-145) |
| GeneOntology terms | GO:0042051 compound eye photoreceptor development GO:0042052 rhabdomere development GO:0001709 cell fate determination GO:0001751 compound eye photoreceptor cell differentiation GO:0016330 second mitotic wave involved in compound eye morphogenesis GO:0008090 retrograde axon cargo transport GO:0005869 dynactin complex GO:0003777 microtubule motor activity GO:0005737 cytoplasm GO:0007018 microtubule-based movement GO:0048477 oogenesis GO:0045502 dynein binding GO:0001754 eye photoreceptor cell differentiation GO:0051028 mRNA transport GO:0005739 mitochondrion GO:0047497 mitochondrion transport along microtubule GO:0000776 kinetochore GO:0031616 spindle pole centrosome GO:0005828 kinetochore microtubule GO:0006886 intracellular protein transport GO:0051383 kinetochore organization GO:0051299 centrosome separation GO:0051225 spindle assembly GO:0007052 mitotic spindle organization |
| InterPro families | IPR000938 Cytoskeleton-associated protein, Gly-rich domain IPR023092 Cytoskeleton-associated protein, Gly-rich conserved site IPR022157 Dynein associated protein |
| Orthology group | MCL13684 |
Nucleotide sequence:
ATGTCGGATAAGAATCTGACGCTGGGTCAGCGTGTGATGGTGATAGGGAAGGAAGTAAAA
GGGTCCATTGCATACGTCGGCAACCCAACATTCGCGTCCGGGAAATGGATTGGTATCATT
TTGGATGAGCCCAAAGGCAAAAATAATGGTACACTGCGCGGACATGCATACTTCAGCTGC
GAAGAGAAGTACGGCGTGTTTGTGAGACAGACCCAGATACAACTCTTGGATTCAGAAGAC
AACCCCATGGACACCTCCATGACGGCTTCCACCGAGGAAACCAAACCGACCAGACGTCTC
AGCAGGGTGCGGCGAAAGGCGTCACCGGCGCAGACGAAGACTGGAAGCCTGTCCATGTCG
AGTTCCAGAACCTCCCTGGCCAGCAGCCGTCAGTCGTTGACGTCATTCGTGTCACCGACG
ACCGAGAGAGGGACTTCCCCCGATCTCACAAAACGTGCTTCCTTTGTTGAGACTGGTTTC
GTGGAGACTTTAACACCTCAATACACTCCGGGTCAGAGTTTGACCTCGCCATCAACAGCC
TCTGAGGATAAACTGGCGAACATACAGGCGCAACAGGAGATTGTGAACCTAAAAGCTGAG
GTGGAAGATTTGAAGGAGAAGCTGGAAACTCTGAAAGTCAGACGGGCCGAGGACAGGGAG
AAGCTTCGAGAGCTGGAGAGAATGAGGTTACAGCTGGACCAGGCGAATGAGTTCAAGGCA
AAGATCATGGAGTCACAGGCACAGCTGCAAAGGGACCTGCAGAGGGCCAAACAAGAGCTG
CGTGAAGCCCAAGAAGCCCTGGACCAGCACAACGACGAGACAGCTGACCTGCAAGAGGCA
GCTGAAATGGCGGCTCTTGATAAAGAAATGGCGGAGGAGAGGGCGGAGGCTCTACAGCTG
GAGCTGGAACAGGCGAGGGAGAAGCTGGAAGAGGCGACGCTAGACCTGCAACTCATGAGG
GCTGAGATGGAAGCTGGCGGGAATATACAACACCCGTATGCAGCGGGCGACAGTGGCGCC
ACCGGTTACGAGGTGAGGCAACTACAGCAACAGAACGTCCGTCTGAGGGACACGCTGGTC
CGCCTCCGAGACCTCTCCGCCCACGATAAGCATGCAATGCAGAAAATGATGAAGGATTTG
GAGCAATACAAGTCGGAGATAGCTGAACTGTCGAGGACTAAGGAGAAGCTGTCAGCGAGG
GTTGAGGAGTTGGAGGCTCAGGTCGCTGATCTCAGAGAACAGGTGGACGCCGCTCTAGGC
GCTGAAGAGATGGTGGAACAGCTGGCTGAGAAGAAGATGGCTTTGGAAGATCAGGTGGAA
CAGCTGAAGCAGGACGTATCAGAGCTGGAGGCGCTGCAGGAGGTTCACGAACAGCTGGTG
GAGTCCAACCGGGAGCTGGAAATGGATCTGCGCGAAGAGCTGGAAATGGCGCACGCTGCT
ACCCGGGAGGCGGCCCGTGAGCGTGAAGCGGCCTTGGAGACGATCATGGATAGAGATGCG
ACCATCATCAAGTTCAGGGAGCTGGTGCAGAAGATGACGGAACAGCAGAACGAGCTCAAG
AGCCAGGTTGAGAACAAACAGGGTGACCACGAGCCGTCTCCGGAGGGCGAAGCGCCAGAG
GCTGCGCCCCGCGAGCTCGGAGCCCTGGTGCTCCAATCCAGGGCTGCCACCCGCTCTGTA
GACCTGCAGTTGAGGGCTCTCGAGCTGGAACAGGCTCGGGCCAGGGCTGATAGATTGGCG
GCGTGTCTACCTGATCATTTCATGGCACCCAACGACTTGGGCCTGTCCAGAACTAACTTC
AGTTCATTCTTGGAACGTACTTCGAACGCTGGCCTAGTAGGTTCGTTTCAAATTTGGTTT
GGTGGAGAGAGGAGCTTGGACGGTGGTGAGCGTTTAACGTTAGATAGGGGCCTGAAACCT
ACTCCTGGTGATCACGACGCCATCATGTTCATTCTGCTTCTACAGCGGTTGGACACCAAG
TCCGAGATCATACTCGGACAGATCAGGGAGAAGTTCCCACCTGTGAACGTCTGGGATAAG
GAATCGGTTATGAGAACCCACACAGCTGTCCAGTACAGCTTCAGATGCCAGCTGGAATAC
CAGCTGCAAATGATACAGTGCATGACATCTATGTGGTCTGGTGCGCTGGAGCGCTGCAGT
CCTGAACTACTACTTCGAGCTGCTTCAGCGCTGCCGGATGCTGCAGCACAGGAGAGAGCA
CTAGATGCTGCGACCAGCCTGCTAAAGAACAATGAATTAGATGAGAACAGCTCTTTAGAT
GGCATGGAGCGGTGTTGGTCCTATCTAAGCGCTATGTGGTCCGCTCTGAACATGTCGTCG
GTGGAAGGCGCGTCTTGTACTAGGGATGTGTTGCTACACTCGTGTTTCGCCCTGGACGCG
CTCGCGAGAGCCCTAGCAGCTGATGGGGCGGCGTTACAGCATGTTATGCTGCCGTCCGAT
CATCAGCAAGAGCTGGGACAGCTGCATGAGGCCATCCAGTCCAGCTGCTCGTCCCTCCAG
CAGCAGCTGAAGAGCGTGAGGCGCAGGCTCCAGCCTGGAGTCAAGCCCTCCACTCTGCCT
ATAGACGCTCAGCTGGTGGATCGTCTCCGGGGGTCCACAGCGGCGTCTCTGAGCAAGTGC
GCCCGCGCCACCTCCCTCGCCGCCCGGGCTGCTAGCGCCTGCGCCGACACGGCCGGGGAG
AGGGGCGAAGGCGCTCCGCTAGCACACGCAGCCATACAAGCGGTGTGGCTGGCGGCCTTC
GATAAGATATACCAGCAGGAAGAGCAGGGCGTTGTCAAAACTGTGAAGAACGCGCTGTCA
CAGACGGCCAAGGACGTAGACGCGCTGGCGACCTTCGTGAGGGACCGCGAGTACGACCTG
ATGTCCAGCACCAACGGAGCTGATGATACGCCGACTCCGCCTATAGTGCTCCGAGCGCAG
CTGGTGAAGAAACAGCTGGAAGAGACGAAGACCTTGACAATAAGGCTTGAGAATAAGGAG
GCTGATATTAAAGAACTGAAGAAGGCGCTGAAGGCCAAGCAAGAAGAATTGTCTGAGATG
CAAATAAGGCGGGAGCTGGGCGAGAGGAAACTGGTCGCTGCGGCGAGGGACGCCGAGCTG
AAGTCGCAGCAGCTGCAGCGGCGGCTGGACGACGCGCAGAACCAGTTCAAGAGGAAAGAG
AAGGAGTTCGAGGAGACTATGGACCACCTGCAGCAGGACATAGACCTGCTGGCCAGCGAA
CGAGGAGCTCTCAGGGACAAGCTGAAGCTATACGCTAAGAGGTCACATCACGCTCTATCG
TCGCCGGTGGCTGCGAGGGAGTACCCACCGTCGCCGGTGGCGTCCGCTCCGAGGGATATC
CGTAAGAGTTTTATCGCGTCTAGCTCAGCATGGCTTTGTCTATACATGATTATAAAATAA
Protein sequence:
MSDKNLTLGQRVMVIGKEVKGSIAYVGNPTFASGKWIGIILDEPKGKNNGTLRGHAYFSC
EEKYGVFVRQTQIQLLDSEDNPMDTSMTASTEETKPTRRLSRVRRKASPAQTKTGSLSMS
SSRTSLASSRQSLTSFVSPTTERGTSPDLTKRASFVETGFVETLTPQYTPGQSLTSPSTA
SEDKLANIQAQQEIVNLKAEVEDLKEKLETLKVRRAEDREKLRELERMRLQLDQANEFKA
KIMESQAQLQRDLQRAKQELREAQEALDQHNDETADLQEAAEMAALDKEMAEERAEALQL
ELEQAREKLEEATLDLQLMRAEMEAGGNIQHPYAAGDSGATGYEVRQLQQQNVRLRDTLV
RLRDLSAHDKHAMQKMMKDLEQYKSEIAELSRTKEKLSARVEELEAQVADLREQVDAALG
AEEMVEQLAEKKMALEDQVEQLKQDVSELEALQEVHEQLVESNRELEMDLREELEMAHAA
TREAAREREAALETIMDRDATIIKFRELVQKMTEQQNELKSQVENKQGDHEPSPEGEAPE
AAPRELGALVLQSRAATRSVDLQLRALELEQARARADRLAACLPDHFMAPNDLGLSRTNF
SSFLERTSNAGLVGSFQIWFGGERSLDGGERLTLDRGLKPTPGDHDAIMFILLLQRLDTK
SEIILGQIREKFPPVNVWDKESVMRTHTAVQYSFRCQLEYQLQMIQCMTSMWSGALERCS
PELLLRAASALPDAAAQERALDAATSLLKNNELDENSSLDGMERCWSYLSAMWSALNMSS
VEGASCTRDVLLHSCFALDALARALAADGAALQHVMLPSDHQQELGQLHEAIQSSCSSLQ
QQLKSVRRRLQPGVKPSTLPIDAQLVDRLRGSTAASLSKCARATSLAARAASACADTAGE
RGEGAPLAHAAIQAVWLAAFDKIYQQEEQGVVKTVKNALSQTAKDVDALATFVRDREYDL
MSSTNGADDTPTPPIVLRAQLVKKQLEETKTLTIRLENKEADIKELKKALKAKQEELSEM
QIRRELGERKLVAAARDAELKSQQLQRRLDDAQNQFKRKEKEFEETMDHLQQDIDLLASE
RGALRDKLKLYAKRSHHALSSPVAAREYPPSPVASAPRDIRKSFIASSSAWLCLYMIIK