| New model in OGS2.0 | DPOGS200143 |
|---|---|
| Genomic Position | scaffold328:+ 147939-150521 |
| See gene structure | |
| CDS Length | 1557 |
| Paired RNAseq reads | 353 |
| Single RNAseq reads | 935 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002786 (0.0) |
| Best Drosophila hit | CG7747 (1e-176) |
| Best Human hit | peptidyl-prolyl cis-trans isomerase-like 2 isoform a (1e-153) |
| Best NR hit (blastp) | cyclophilin [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | peptidyl-prolyl cis-trans isomerase 4 [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0003755 peptidyl-prolyl cis-trans isomerase activity GO:0006457 protein folding GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR015891 Cyclophilin-like IPR003613 U box domain IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR020892 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL13005 |
Nucleotide sequence:
ATGGGGAAACGACAACATCAGAAAGATAAAATGTACCTCACTTACACTGAATGGACAACT
TTATATGGTGGTAAAAGATCAGGGACAGCAGTTGAGGAGGACTCATCGTTTAAGCGCCTC
CCATTTGATCACTGCTGCCTTTGTTTACATCCATTTGATAACCCTTATTGCGACAGTGAC
GGAAATATATTTGAATTGCAAGCTTTGACGGACTTCATCAAAAAGTTCAAAATCAATCCA
GTCACAGGAAAGAAAATAGATGTTGCAAGTTTAATAAAGCTCAATTTCACAAAAAATGCT
GAAGATTCCTACCATTGCCCAGTTTTATTCAAACCGTTCACTAAGAATTCACATATTGTG
GCCATACGGACCACGGGTAATGTGTACTGCTATGAAGCGGTTGAACAGCTTAACATTAAG
GGCAAGAACTGGAAGGATCTCCTCAACGACACTCCATTCGCAAGAACCGATATCATAACA
ATACAGGATCCGAACAATTTGAAAAAATTCAACATATCCACATTCCATCATATAAAAAAC
AATTTGAGAGTGGAAACCGAAGAGGAGATTGCACTCCGCAAAGATCCACATGCAAGATTA
AAAACTGTATCAGCCGAAACAAAAGACATTTTACAAGAACTGGAAAAAGAGTACAAAGCT
CCGGAAACTAAAGAAGTTAAAAAGGAGGTAGCTGACAAATTCAATGCAGCACACTACTCA
ACAGGAATGGTGGCGGCGAGCTTCACATCTACAGCGATGGCACCGGAAACTGTTCATGAA
GCAGCAGTCATATGTGAGGATGAAGTAAAATATGATAGGGTTAAGAAAAAAGGCTATGTA
CGTTTAGTGACAAACTTAGGTCAACTAAACTTTGAACTGTACTGTGATTTGACACCTAAG
GCATGTGACAATTTCATAAAACATTGTTTAAGTGGTTACTATAATGGCACAAAGTTTCAC
AGGTCAATAAGAAATTTTATGATCCAAGGTGGTGATCCAACGGGAACAGGTTTAGGCGGT
GAGTCAATATGGAAGAAGCCATTTGAAGATGAAGTGAAACCAAACTTGCACCACACTGGC
CGAGGCATACTTTCCATGGCTAATTCTGGACCTAACACAAATGGGTCGCAATTTTTCATA
ACTTTCCGTTCCTGTAAACAGTTAGATGGTAAACACACAATATTTGGTAAACTGGTTGGT
GGTATCGATACACTTACAGCCATGGAACAGATCGAGGTCGACAACCGTGACAGACCTATA
GAGGATATTGTTATAGAAGTTGCCCAGGTGTTTGTTGACCCATTTGCTGAGGCCGAAGAA
CAGCTTGCTGCGGAAAGAGCTGCTGAAACTAAAAAGCAAGCAGAGGCCGAAGGATCTGGC
GTTAAACCCAAGAAGGCATCAGCAAAACCTCTTAAAGTGTTCAGGAGTGGAGTCGGGAAA
TATTTAAATTTACAAGAATCATCCGCTACCAGTAAAACTACAAAAAGCCAAGAGGTCCCC
GCCAAGAAACCCAAGAAAGATGCCAATTATAACTTCGGTGCATTCGACTCTTGGTAG
Protein sequence:
MGKRQHQKDKMYLTYTEWTTLYGGKRSGTAVEEDSSFKRLPFDHCCLCLHPFDNPYCDSD
GNIFELQALTDFIKKFKINPVTGKKIDVASLIKLNFTKNAEDSYHCPVLFKPFTKNSHIV
AIRTTGNVYCYEAVEQLNIKGKNWKDLLNDTPFARTDIITIQDPNNLKKFNISTFHHIKN
NLRVETEEEIALRKDPHARLKTVSAETKDILQELEKEYKAPETKEVKKEVADKFNAAHYS
TGMVAASFTSTAMAPETVHEAAVICEDEVKYDRVKKKGYVRLVTNLGQLNFELYCDLTPK
ACDNFIKHCLSGYYNGTKFHRSIRNFMIQGGDPTGTGLGGESIWKKPFEDEVKPNLHHTG
RGILSMANSGPNTNGSQFFITFRSCKQLDGKHTIFGKLVGGIDTLTAMEQIEVDNRDRPI
EDIVIEVAQVFVDPFAEAEEQLAAERAAETKKQAEAEGSGVKPKKASAKPLKVFRSGVGK
YLNLQESSATSKTTKSQEVPAKKPKKDANYNFGAFDSW