| New model in OGS2.0 | DPOGS201885 |
|---|---|
| Genomic Position | scaffold5760:- 3903-8108 |
| See gene structure | |
| CDS Length | 1080 |
| Paired RNAseq reads | 5 |
| Single RNAseq reads | 12 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006063 (2e-55) |
| Best Drosophila hit | nervana 2, isoform F (3e-32) |
| Best Human hit | sodium/potassium-transporting ATPase subunit beta-1 (9e-12) |
| Best NR hit (blastp) | PREDICTED: similar to sodium/potassium-dependent atpase beta-2 subunit [Nasonia vitripennis] (1e-39) |
| Best NR hit (blastx) | PREDICTED: similar to sodium/potassium-dependent atpase beta-2 subunit [Nasonia vitripennis] (2e-41) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005391 sodium:potassium-exchanging ATPase activity GO:0005890 sodium:potassium-exchanging ATPase complex GO:0008324 cation transmembrane transporter activity GO:0006812 cation transport GO:0007424 open tracheal system development GO:0035151 regulation of tube size, open tracheal system GO:0005918 septate junction GO:0019991 septate junction assembly GO:0035158 regulation of tube diameter, open tracheal system GO:0035159 regulation of tube length, open tracheal system GO:0006813 potassium ion transport GO:0006754 ATP biosynthetic process GO:0006814 sodium ion transport GO:0060857 establishment of glial blood-brain barrier |
| InterPro families | IPR000402 ATPase, P-type cation exchange, beta subunit |
| Orthology group | ND |
Nucleotide sequence:
ATGTACGCTAAACCCCGTGACCTCGTTGAACAGTCGGCGTCAGCTCAAAGCTCCTCCGCT
GCGAGTCAGTCTGGTGCGGACGCTCGACGCGATGGCTCTGGAGAAGAGAACCCTCAAACT
GGTAGCTCTCGTCGTCTTCGTGTGTCTGATAGTACTGGTTTCGGTAACTTTGCAGCGACC
ATGATCACGGACAGACGAGATATTAATGTCTGTCAGTTGGTCTTGTTATTTAGCATCTAC
CGCCATCGATTTCTTAATTTTCTGGCGTCCCGCTCTGGATGCTGGCACAAAGGGCCGGTG
ACACGAGGTTTCATAATCGGTGGTATTATCATAGGGCTATCGACCGGCTACCGCTACCCA
GGACTGGAAGTATGGCCAAGATCGGAAGAATACAACTACGAGCAGCCCCTCATCCAGTTT
AGAGCCAGCGACCCAGGCAGCTGGCATCCTTGGTTTAAGAGAATCAATGACTTTCTTTTG
GCTTACGAGACGACGGTTCCAGAGGAGCCCCCTCGTGCTCCATGCTCGGTGCGGCGTCAC
GACCAGCGCGTGGTGGTGGCGGCCTGCGAGCGTGTCCTCGGCATGTGGGCTCCGTGTAAC
GCAGATAATTTCTATGGCTATGCTGTCGGCAAACCTTGCGTCTTCCTTCGATTAAATAAC
CTGCATTACTGGGTTCCGGAGCCCTACAACATCTCGAAGCCCATGAGCATTCCTCCAGAT
ATGCCTAACAACATAAAGCAGGCTATGCGACAACGTCCTGCGAATCATTTCGGCGATTAC
ATTTGGGTCTCCTGTAATGGCGAGTTCAGTTCCGACGAGGAGAACATTGGTCCAATCCAG
TACATACCCGGGAACCTGCCCCCCGGTTTTCCTACCAAACGTCTTCAAACCGCCGATCGC
ATCTCAAGAATCGCCCAAGACCGTCCCGACCAGACGCCTGGACCGTTGGTGGCAGTCTTT
TTTGAAAATCCACGCCGAGGCGTGGTCATCAACGTGGAGTGTCGGATCTGGACGCGCGAC
ATCATCTACGACCGCTCCAGCAGATACGGTCGCGTGCGTTTCGAATTGCAAGTCGATTAA
Protein sequence:
MYAKPRDLVEQSASAQSSSAASQSGADARRDGSGEENPQTGSSRRLRVSDSTGFGNFAAT
MITDRRDINVCQLVLLFSIYRHRFLNFLASRSGCWHKGPVTRGFIIGGIIIGLSTGYRYP
GLEVWPRSEEYNYEQPLIQFRASDPGSWHPWFKRINDFLLAYETTVPEEPPRAPCSVRRH
DQRVVVAACERVLGMWAPCNADNFYGYAVGKPCVFLRLNNLHYWVPEPYNISKPMSIPPD
MPNNIKQAMRQRPANHFGDYIWVSCNGEFSSDEENIGPIQYIPGNLPPGFPTKRLQTADR
ISRIAQDRPDQTPGPLVAVFFENPRRGVVINVECRIWTRDIIYDRSSRYGRVRFELQVD