New model in OGS2.0 | DPOGS206125  |
---|---|
Genomic Position | scaffold4:+ 73827-92828 |
See gene structure | |
CDS Length | 2007 |
Paired RNAseq reads   | 212 |
Single RNAseq reads   | 681 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003851 (0.0) |
Best Drosophila hit   | shaker, isoform E (0.0) |
Best Human hit | potassium voltage-gated channel subfamily A member 2 (2e-136) |
Best NR hit (blastp)   | PREDICTED: similar to Shaker CG12348-PC [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | AGAP000254-PA [Anopheles gambiae str. PEST] (0.0) |
GeneOntology terms    | GO:0007629 flight behavior GO:0005249 voltage-gated potassium channel activity GO:0008076 voltage-gated potassium channel complex GO:0016021 integral to membrane GO:0006813 potassium ion transport GO:0007619 courtship behavior GO:0050909 sensory perception of taste GO:0007611 learning or memory GO:0048150 behavioral response to ether GO:0022843 voltage-gated cation channel activity GO:0005515 protein binding GO:0055085 transmembrane transport GO:0048675 axon extension GO:0030431 sleep GO:0007637 proboscis extension reflex GO:0009584 detection of visible light GO:0001508 regulation of action potential GO:0060025 regulation of synaptic activity GO:0008345 larval locomotory behavior GO:0045187 regulation of circadian sleep/wake cycle, sleep |
InterPro families    | IPR011333 BTB/POZ fold IPR003091 Voltage-dependent potassium channel IPR003972 Potassium channel, voltage dependent, Kv1 IPR003968 Potassium channel, voltage dependent, Kv IPR000210 BTB/POZ-like IPR005821 Ion transport IPR003131 Potassium channel, voltage dependent, Kv, tetramerisation |
Orthology group | MCL10347 |
Nucleotide sequence:
ATGAATCCGATGCAAAAAGTTATTCGAATAGCAGAAAAATGTAATCTCTTTGAAAAGCTC
TGGAAAATCCAGCTGGCGAGATTCTCGGTCGAACATCCCAGTCGCTGCCGAAATTGTGCA
GTCAAGAAGAGGAGCAGGGCCGGCCGCCAGGGCCGGCCGCCACAGGGCGGCGTGGTAACA
TTTGAACCGATACAACATGACCACGACTTCTGCGAGAGGGTCGTGATCAATGTAAGCGGC
CTCAAATTTGAAACACAATTACGGACACTCAACCAATTTCCAGAGACACTGTTAGGCGAC
CCTGCAAGGAGAATTAGATACTTCGATCCACTCAGGAACGAGTACTTTTTTGACAGAAAC
AGGCCGTCCTTTGACGCCATCCTGTATTATTACCAGAGCGGTGGCCGTCTGCGACGCCCC
GTCAATGTCCCGCTGGACGTATTCTCAGAGGAAATTAAATTCTACGAACTTGGAGAGCAA
GCTACCAACAAATTCCGTGAGGATGAAGGATTCATAAAGGAAGAGGAGAAACCCCTACCC
TCCAACGAACGTCAACGCAAAATCTGGCTGCTTTTCGAATACCCTGAAAGCTCCCAGGCC
GCCCGAGTCGTTGCCATCATCTCAGTCTTCGTTATCTTACTGTCAATCGTCATCTTCTGC
CTGGAAACCCTTCCAGAATTCAAACACTACAAAGTTTTCAACACCACTACAAATGGAACA
AAGATTGAAGAAGACGAAGTACCTGATATTACTGATCCATTTTTCCTCATCGAGACGCTC
TGTATTATCTGGTTTACATTCGAATTAATAGTTCGGTTTCTTGCTTGTCCAAATAAATTC
AACTTCTTCAGAGACGTGATGAATATCATAGATATAATCGCCATTATACCATACTTCATC
ACTCTGGCAACGGTAGTCGCTGAAGAAGAAGACACGCTGAACCTTCCAAGAGCTCCTGTA
TCGCCGCAAGACAAATCCACCAATCAAGCTATGAGTCTTGCCATACTTCGTGTGATTCGT
CTAGTTCGTGTATTCCGTATATTCAAACTATCGCGTCACTCCAAGGGCTTGCAGATTTTA
GGAAGGACGCTAAAAGCATCAATGAGAGAACTCGGACTTTTGATATTTTTCCTCTTCATA
GGTGTGGTGCTGTTTTCATCTGCGGTGTACTTCGCGGAAGCCGGAAGTGAGAACAGCTTC
TTCAAATCCATACCTGATGCGTTTTGGTGGGCGGTCGTGACAATGACGACCGTAGGATAC
GGCGACATGACGCCGGTTGGCGTGTGGGGTAAGATCGTGGGATCGCTTTGCGCGATTGCT
GGTGTACTTACCATCGCTCTGCCGGTACCCGTCATCGTGTCTAACTTCAACTATTTCTAC
CACCGTGAAACTGACCAAGAGGAAATGCAATCCCAGAACTTCAACCACGTCACCAGTTGC
CCCTACTTGCCCGGGACTTTGGGTGAACCCTACTTGAGTGCGATCAAGAACTCCTCAGTG
AGTGATGACTCGTCTTCGGAATTGATGGAGCTTGAAGATGCAGCTTTACTCGCTGACCCT
CAACTTGAGAATAACATCCGTCGTCTGCGCGAAGAAGAGCGTCTTCTACTGGAACAACAG
GCCGCCATGGAGGCTACAGGCAACACCGACGACATTGCAGCTCTGGAACATCAGGATCTT
CTACGTCTTAACCACCTTAAACAGCAAGAGCTGCAGAGGCAGCTGGTTATTCTCGCTCAG
CGTCAGGCACGTGCCAATGCCAATGCCAATGCCAATGCCAATGCCAACGCTAGCTCCAGC
CTGTTGGCGATCGAGGGACCGAGGGATCGTTCCACAGAAGACACCGATCGCAGCGAACGC
CAGCGTGCCTGCCGCAGCGATCTGAATGAGCGTAGTGACCGCCTAGAGCGATCTGATCGC
GGGGAACTTCGTCGACGTACATGCAACGTGCGTGTAAATGCTCTCCACGTCGCGTCCTGT
GCGGAGGCGTTGGAGACGGACGTCTGA
Protein sequence:
MNPMQKVIRIAEKCNLFEKLWKIQLARFSVEHPSRCRNCAVKKRSRAGRQGRPPQGGVVT
FEPIQHDHDFCERVVINVSGLKFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRN
RPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGEQATNKFREDEGFIKEEEKPLP
SNERQRKIWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGT
KIEEDEVPDITDPFFLIETLCIIWFTFELIVRFLACPNKFNFFRDVMNIIDIIAIIPYFI
TLATVVAEEEDTLNLPRAPVSPQDKSTNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQIL
GRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGY
GDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSC
PYLPGTLGEPYLSAIKNSSVSDDSSSELMELEDAALLADPQLENNIRRLREEERLLLEQQ
AAMEATGNTDDIAALEHQDLLRLNHLKQQELQRQLVILAQRQARANANANANANANASSS
LLAIEGPRDRSTEDTDRSERQRACRSDLNERSDRLERSDRGELRRRTCNVRVNALHVASC
AEALETDV