New model in OGS2.0 | DPOGS206149  |
---|---|
Genomic Position | scaffold4:+ 679867-686979 |
See gene structure | |
CDS Length | 816 |
Paired RNAseq reads   | 424 |
Single RNAseq reads   | 2241 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000710 (4e-67) |
Best Drosophila hit   | Vap-33-1, isoform C (5e-25) |
Best Human hit | vesicle-associated membrane protein-associated protein B/C isoform 1 (5e-33) |
Best NR hit (blastp)   | PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum] (7e-58) |
Best NR hit (blastx)   | PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum] (5e-44) |
GeneOntology terms    | GO:0005198 structural molecule activity GO:0008150 biological_process |
InterPro families    | IPR008962 PapD-like IPR016763 Vesicle-associated membrane protein IPR000535 Major sperm protein |
Orthology group | MCL11857 |
Nucleotide sequence:
ATGCCTAACCAAGTGTTAATTATAGAGCCGCAAAATGAACTGAAGTTTAAAAGCTTCTTT
GATATGGGATGCACTACTTATATGAAACTGACGAATCCAACTGATCATACCGTGTTGTTT
AAAATTAAGACAACAGCACCAAAGAAGTATTGTGTGAGACCCAATTCAGGGTTTTTGGAT
CCAAAATCTAAAGTTGATATAGCTATTACCCCTCAACCTGTAAATGTTGAGTCCAATGAG
AAAAATAAACACAAGTTTATGGTGCAAAGTGTTATTGCTCCAGAGGGGAAAATTAACATA
GATCAAGTGTGGAAGGAAATAAATCCTAAACAGCTCATGGATTATAAATTAAAGTGTGTC
TTTGAAACGCCACAAGTAAAAAGCGCTAATGATTCCGGTGACAACGCAGCGGCGAACGAA
GTCACCAAGAAGAGGGTGGCTGTGGCCGACGAGTCAAAACCAGCTGTGAAGGACTCTGAC
GGTGTCCAGAGCGAATCGAACAGACGGGATCCGGACGCGGCGGTGAACCAGTCGACGGAT
GTTTTACAAAAATCTGAAAATCTCGAAAGCGATTTGCAAAAGGCGACGAATGAAGTCATT
CATTTGAGGGAGGAGGAAAGTATTTTAAGACACGAAAATCTCCGATTAAAAGAGGAGTTG
TTGCGTTTGCACCAGGGCGGTGCCGGTGAGGGCCGTCCCGCGCGCGGCCACTCGTACGGC
CCGGAGAAGACGGAACACGCGGCGCTCATGGCATGGGTGGCCACCGCCATAGCCATGGCA
TTACTCGGCATCATCATCGGCAAGTTCATCATGTGA
Protein sequence:
MPNQVLIIEPQNELKFKSFFDMGCTTYMKLTNPTDHTVLFKIKTTAPKKYCVRPNSGFLD
PKSKVDIAITPQPVNVESNEKNKHKFMVQSVIAPEGKINIDQVWKEINPKQLMDYKLKCV
FETPQVKSANDSGDNAAANEVTKKRVAVADESKPAVKDSDGVQSESNRRDPDAAVNQSTD
VLQKSENLESDLQKATNEVIHLREEESILRHENLRLKEELLRLHQGGAGEGRPARGHSYG
PEKTEHAALMAWVATAIAMALLGIIIGKFIM