| New model in OGS2.0 | DPOGS201962 |
|---|---|
| Genomic Position | scaffold384:+ 86677-98632 |
| See gene structure | |
| CDS Length | 5328 |
| Paired RNAseq reads | 622 |
| Single RNAseq reads | 1510 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010542 (0.0) |
| Best Drosophila hit | Cad86C (0.0) |
| Best Human hit | cadherin-related family member 1 isoform 1 (1e-45) |
| Best NR hit (blastp) | cadherin [Drosophila melanogaster] (0.0) |
| Best NR hit (blastx) | cadherin [Drosophila melanogaster] (0.0) |
| GeneOntology terms | GO:0005887 integral to plasma membrane GO:0016339 calcium-dependent cell-cell adhesion GO:0016021 integral to membrane GO:0007156 homophilic cell adhesion GO:0005509 calcium ion binding GO:0035003 subapical complex GO:0008360 regulation of cell shape |
| InterPro families | IPR015919 Cadherin-like IPR002126 Cadherin IPR020894 Cadherin conserved site |
| Orthology group | MCL15753 |
Nucleotide sequence:
ATGACCTTAACGGCGGTGCTGGTGTTATTGACGCTGGCTGCGGCAGCTCACAGCGGCGAT
CCCGTGTTCGACCCCAGCACACTCATGAGGCTCGTGCTGGTGCCGGCAGACGCGGCCACC
GGCTCCGTCATCTACCGCGTTCGAGCTTCCGATCCGGACTTCGATTACCCCCTGCACTTT
GAACTTATCGGGCAAATGGGCAGACTCGACATAGGCATTGAGACATTACCTTGTACTCGG
TACAATTCAGTCTGTCAAGCCAATGTGATATTGCTAAGGAGGCTGGAGCCAGGCCGCTAC
GTGGACTTTAGGCTGTCGGCTCGGAATACCAGAGGGCGAAGTGCTCGAATTGCCTGCTCG
ATCACAGGCACTAATGCTACTACCCCTCGAGATACTATATTTCCTCATCAACCCAGTATC
ATTTTGGTGCCAGAGGATGCGAAGAGAGGAACCGACCTTGAAATTGTAATTGCAAGGAAG
AATCCAGTATCCCCAAAACCTCTGGAGTTGGAGCTTTGGGGTTCACCGCTCTTCGCAATC
CGTCAACGCCGAGTTTCTAGCGAGAATACCGAGGGCACAATATTTTTAGTTGGTCCATTG
GATTTTGAGGCTCAATCCATGTATCACCTAACATTGCTCGCTGTTGATCCCTACGTCGAA
ATAGGCAAGGACACGCGAAATATAGCTGGTTTAGAGGTTGTGGTGGTTGTGCAAGATGTT
CAGGATATGCCTCCTGTTTTTACTTCAGCTCCACCCATCACCCATTTACCTCGACAAGTA
ATTCCTGGTGATATGATTGTAAGAGTAAGAGCTGAAGATGGAGACAAGGGTGCTCCTCGG
CAAATAAGATATGGACTAGTTTCTGAAGGGAATCCGTTTACACCGTTCTTTAACATCAAT
GAAACAACAGGTGAGGTAACTTTGGAACGGCCGATTGAAGAAATTGCAGCAATATCACAC
GCTGGAGCACCAATACTTCTTACTGTTGTTGCTGAAGAAGTACGACTTTCCCGGGAGGAA
CCGGAGGCTATGTCATCGACGGTTCAACTGGCGTTCATTTTACCTGAAAGGGATAATTCT
CCTCCGTATTTTGAAAATGAATCTTACATTACACATTTGGATGAAAATGCTCCGCAAGGT
ACAGCTTTGGTATTCAACGATCCGTATATACCGCAAGTGAATGACAACGATGCGGGAAAA
AACGGAGTGTTTTCTCTTTCGTTAGTTGGAAATAATGGGACTTTTGAAATATCACCAACA
GTGGCGGAGAGACACGCGCAATTCATTATCAAAGTGCGGGACAATACTATGCTGGATTAT
GAAGCCAGAAAATCAGTCGTGTTTCAGATTTTGGCACAAGAACTTGGTCCAGCAACAAAC
TTGTCAGCAACTACGGATGTGACCGTTTACTTGAATGATGTTAATGATAATCCTCCTATT
TTTTTGGCCTTATCTTATGATGTGGAATTGCCAGAAAACGTTACAGCTGGAACTAGAGTT
GTCCAAGTTGCAGCTGATGATGTAGATACAGGGGCATATGGAAAAATTCAATTTACTGCC
ATACTAGGATATTTAAATACTTCTTTAAATTTAGATCCTATAACAGGAGTTATAACTGTA
GCAACAAATAATCACGGTTTTGACCGTGAAGCAATGCCAGACCTGCATTTTTTAGTAGAA
GCTAGAGATAATGACGGTATAGGATTAAGAGTAACAGTGCCATTAATTATTAAGTTATTA
GATGTAAATGATAACCCACCAGAGTTTGAAAGGGCCTTATATGAATTTGTATTGTCTCCG
AGTTTAAATAATTTTACTTCATCGGCATTTGTGAAGGCTGTTGATAAAGATGCCGAACCA
CCAAATAATGTAGTCAAATACGAAATAATTGAAGGAAACCGTGAGGGTAAATTTGCTATT
AATGAAGATACAGGGGAAATTTATTTATTAGAACCATTGAAAAGAATCACAAAGAAAAAT
GCAAATAGGCGTAAAAGGCAATTTGATAATCAAGAAGAGAGTGAAGTTTATATGTTAACT
ATTCGAGCCTATGATATGGGAGTTCCAAGGTTGTTTTCAACAACAACAGTGAAGATTTAT
CCTCCAGAAAGTAAAACTAGAACTATGTCTTTCATTGTTCCCGGTGCTAATCCAGATAGA
AAAAAATTAGAAGAAGTTTTGAGCACATTATCTGGAGGAAAAGTAACTATTGTAGATATA
AAACCTTACAAAACTAATGATGATAAAGGTTCAATAGATCAGAGTGGCCAGGCGTCTAGT
CAAGAAAAAAGTGTGGTTACTGCAGTAGTTCGTATGGCTGGTAATGCTGCTATTAATGTT
GCAAAACTTCAAGAACAATTATCAAAGAATATCACATTATATTCCACCACTGTCGTGCAG
AAGGATCAGACATCAATAATTGATAACGATTCTGGCGTGTATAAAGCGGAGAGTCGATTA
TTATTCTGGCTTTTAATCTTATTAGCAATATTAATAGCTCTCGTTTTATTACTTCTTATA
TGTTGCTGTATTTGCGAAGGTTGTCCATTGTATATGCCACCAAGGAAAAGAGTGATACGT
GTCAACTCCACAGAGGACGACGTGCATTTAGTGGTCCGCGACAAGGGAGTTGGGAGGGAA
AACAAGTCGACCCAAAACTTAGAAAGTAAATCAATACAAGCACCTGAATGGAGGAGAAGA
GAAGCTTGGAGTGCCGAACAAACAGATATTAGAACAAAACCAACACAATGGAAATTCAAT
AAAAGAAATTATAAATCAAAGGAACTGAGTAAACCCGCTTCTACGCCTGGTGACATTAGA
CAAGAATTTGTGCAAGCTGCCACTGATAATGATTATAAATACGATGATTCTAGACAGTCT
TTTCGACGAAGGGATGGCCCCAACATAATTTATACAAAAGAAATCCAACTTGAAGATAAC
TTTGCTAGTAAGCATAAAGAGTACATAGAAGATCTTGAAAATGGTTATGATAGAATAGCA
ACTCTTCACCATCAACGAAAAGATCAGGACAATGATTCTATAAGAAGACATGAAATCGAT
CGAGGGTCTGAGGTTGAAGGCGATCATAAGACTGATGATAAAAATTTCCATGGTGAACAT
CGATTAAAAATTGAGTACGCTGATAAGCGCGACCCGTCTTCCATGGGCAGAGATCAATTT
TTCATTAAAGAGGGAAACACTGAAATATTAAGGCTCGTTACACGGGGAAAAACTGAGGAC
GAACGATACGTTAACCTTCCTATTCAACAACAACAACGACCAGTTACATTAATTCCTCAC
ACTCAATATGTAGTTGTGGATAATGGTAAGGAATTGTTAATGGAACGATTTATTAGAGAA
CAAGAAGAGGAAGCTAACAACATAAGGGAAAGAATGAGTAAAGTTGTAACTGATTTAGAC
AACGTCCAATCGCCTCAAGATGGTAAAAAGTCTCAACTAATTATAGACAAACATAGTTTT
CCGCCTGAATACACTAATATGACACCAGAAGTCCCAGGGGCAGTTCCTCATAAATCGGAT
TATTTACAATCTGCACTTATAGAAATGCACAATAAGTCATCTATTCACCAAGAACTATTG
GAATCATCATTAAGAAAGCAAAATGAACTTTTACATCAAATATTAATTGAACGTGAAAGA
ATATTACACAATCAGGAAACAGCATCTCAAGTGGAAAATAAGTTAGAGACCCAAAGTTTA
CCAGGACATGCTGTGATGGCTACTCAAACTGAGTGTCATATTGGAACTCAAACAGATTCT
CATTTACTAAATGAAGTGAAACGGAAATCTCGTAGTGATAATGAATCATACAGTGAAGAC
GAATCACAAAAAAATTCAGATAAAACCCATAAAGTAACATGGGTTAAAAAGAAAAAACCA
AGAAAAAAAATTAAATACAAAGACCCGAGGCGTAGTATACGTGTTTATGAATTGAAAAGA
AAAATTAAAACGCCTATAATTGAGGAAAGCGACATATCACCATCTGCAGAGAATGAAAAG
CAGATTAAAATAAGCAAAACAAATGAAAGAGAGGAAAGAATCAAACATTACGGTGACATC
ACCAAAAGTACGGTTACTACTTCTAAGAATGAATATGTCAGTTCCACACAATATAAAAAT
TCAGAACCCGACAGAAAACTTAAATCTCGTAGAGAAGTATTGATGGAAATATCAGATTCT
TTGGATGAAAAATCAACACTTGATAAAAAACAACAACAAGAACCATCTTCTTCTTCATCT
TCGAGAACTGAGAATTTCAAAAGAACTATTTCCTATGACCATGAAAGTAATAAGGGCTCT
CACAGTGGCACAGATTCACCAGGTGAAGATAAACGGAACTCAATATTCTCGCGACAAGCA
TCTTCAGAAGAGGCTAAAGAAAATATTTGTAAACAGTTGGAATGTCATAGTAAAAGTAAT
AAAATTGAAAACCATCAAGAGCTTAGTGATAAAGACCTTTCAACTAACGACTCCATAAAA
ATTAAGGAAAAAGAGAATAAGGAATCTATGAAAACTAATGAAAAGCCTGTTAAAAGTTTA
CCACGATATATGCAATGGTATGGCAAAAAATCAAAACCTTCAACATCTGAAAAAATCGTA
CCAGACAAACCAAAAAGACCATCTAAAATAAAAATAGAACAAGAAAGAGACACAAAAGAT
AGAACAAGCCGATACGGTAAAATTATTAGCAAAGATAGTCAAGTTGGCGAAGTAAAAAAA
AACTTCAAAGAAAAAGAGAGTGATTTTATCCATCCTCGCTTATTAAAAGAAGGAAAGGTA
ACACCTGTTCCAGAAGGACCGTTACCTGATGTACATCCCTTGTTACAACACTCAGAGCAC
AGATACGAGCACCAGTACCAAAATCAAAATCCTCTATGTTACGTTCAACAAACACATATA
CCAAAATACTTAGGTAGCCAAACTGAAAAACCAGTGTTGCCACAAAGAACTTCTTTAGAG
CAACAGCCAATTTATGTCAATCAAGACGGTGTAACAGAAAACAGCACAAAACCGGATATT
GCAGAAAGTGCCTTAACTCATAGCATTGCTATATCAAGTGCGTATGGAAAAGAACAAAAA
ACTGCGTCGGAAGTTCACGTCTCCAAAATTAAAATATCGGGTGAAACGATTTCTGAGAAT
CAAAGAAAATTGGACGACAATGATTCAGGCATAGCTATGAGCACACTTGTACACCAAACA
GGTATTAAGAGATTACCTATAACGGAGAAGAAAAGTGTGTTTACTATTGCATACGACGAC
GTACAAACGAAACAACTACGGCCTGACAGCAGCTCCACCTCTTATTAA
Protein sequence:
MTLTAVLVLLTLAAAAHSGDPVFDPSTLMRLVLVPADAATGSVIYRVRASDPDFDYPLHF
ELIGQMGRLDIGIETLPCTRYNSVCQANVILLRRLEPGRYVDFRLSARNTRGRSARIACS
ITGTNATTPRDTIFPHQPSIILVPEDAKRGTDLEIVIARKNPVSPKPLELELWGSPLFAI
RQRRVSSENTEGTIFLVGPLDFEAQSMYHLTLLAVDPYVEIGKDTRNIAGLEVVVVVQDV
QDMPPVFTSAPPITHLPRQVIPGDMIVRVRAEDGDKGAPRQIRYGLVSEGNPFTPFFNIN
ETTGEVTLERPIEEIAAISHAGAPILLTVVAEEVRLSREEPEAMSSTVQLAFILPERDNS
PPYFENESYITHLDENAPQGTALVFNDPYIPQVNDNDAGKNGVFSLSLVGNNGTFEISPT
VAERHAQFIIKVRDNTMLDYEARKSVVFQILAQELGPATNLSATTDVTVYLNDVNDNPPI
FLALSYDVELPENVTAGTRVVQVAADDVDTGAYGKIQFTAILGYLNTSLNLDPITGVITV
ATNNHGFDREAMPDLHFLVEARDNDGIGLRVTVPLIIKLLDVNDNPPEFERALYEFVLSP
SLNNFTSSAFVKAVDKDAEPPNNVVKYEIIEGNREGKFAINEDTGEIYLLEPLKRITKKN
ANRRKRQFDNQEESEVYMLTIRAYDMGVPRLFSTTTVKIYPPESKTRTMSFIVPGANPDR
KKLEEVLSTLSGGKVTIVDIKPYKTNDDKGSIDQSGQASSQEKSVVTAVVRMAGNAAINV
AKLQEQLSKNITLYSTTVVQKDQTSIIDNDSGVYKAESRLLFWLLILLAILIALVLLLLI
CCCICEGCPLYMPPRKRVIRVNSTEDDVHLVVRDKGVGRENKSTQNLESKSIQAPEWRRR
EAWSAEQTDIRTKPTQWKFNKRNYKSKELSKPASTPGDIRQEFVQAATDNDYKYDDSRQS
FRRRDGPNIIYTKEIQLEDNFASKHKEYIEDLENGYDRIATLHHQRKDQDNDSIRRHEID
RGSEVEGDHKTDDKNFHGEHRLKIEYADKRDPSSMGRDQFFIKEGNTEILRLVTRGKTED
ERYVNLPIQQQQRPVTLIPHTQYVVVDNGKELLMERFIREQEEEANNIRERMSKVVTDLD
NVQSPQDGKKSQLIIDKHSFPPEYTNMTPEVPGAVPHKSDYLQSALIEMHNKSSIHQELL
ESSLRKQNELLHQILIERERILHNQETASQVENKLETQSLPGHAVMATQTECHIGTQTDS
HLLNEVKRKSRSDNESYSEDESQKNSDKTHKVTWVKKKKPRKKIKYKDPRRSIRVYELKR
KIKTPIIEESDISPSAENEKQIKISKTNEREERIKHYGDITKSTVTTSKNEYVSSTQYKN
SEPDRKLKSRREVLMEISDSLDEKSTLDKKQQQEPSSSSSSRTENFKRTISYDHESNKGS
HSGTDSPGEDKRNSIFSRQASSEEAKENICKQLECHSKSNKIENHQELSDKDLSTNDSIK
IKEKENKESMKTNEKPVKSLPRYMQWYGKKSKPSTSEKIVPDKPKRPSKIKIEQERDTKD
RTSRYGKIISKDSQVGEVKKNFKEKESDFIHPRLLKEGKVTPVPEGPLPDVHPLLQHSEH
RYEHQYQNQNPLCYVQQTHIPKYLGSQTEKPVLPQRTSLEQQPIYVNQDGVTENSTKPDI
AESALTHSIAISSAYGKEQKTASEVHVSKIKISGETISENQRKLDDNDSGIAMSTLVHQT
GIKRLPITEKKSVFTIAYDDVQTKQLRPDSSSTSY