| New model in OGS2.0 | DPOGS204584 |
|---|---|
| Genomic Position | scaffold411:- 11278-12730 |
| See gene structure | |
| CDS Length | 1233 |
| Paired RNAseq reads | 215 |
| Single RNAseq reads | 971 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001436 (1e-135) |
| Best Drosophila hit | Leucine-rich repeat 47 (5e-34) |
| Best Human hit | peptidylprolyl isomerase-like 5 isoform 1 (1e-35) |
| Best NR hit (blastp) | PREDICTED: similar to Leucine-rich repeat 47 CG6098-PA [Tribolium castaneum] (6e-69) |
| Best NR hit (blastx) | PREDICTED: similar to Leucine-rich repeat 47 CG6098-PA [Tribolium castaneum] (3e-66) |
| GeneOntology terms | GO:0005515 protein binding GO:0008150 biological_process |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL15532 |
Nucleotide sequence:
ATGAAACTGCAGTGTCAAGTGGAAGTTGTTAATAGAAAACATTTTAGTTTAGACGTAAGA
CCAAAGAATAAGTATTTAAAGTCGACACTTGCTTTAGGAAAGGAACCAAAAGATGATAAA
GGATACTTTATTTTGCATTTTTCTACTGTTAATAAACAAGGAACAAAATATAGAGTCAGC
GATATGAAGAATGTCTTTGTGAAATTTTTAAACGAAGGCAAAGTTACACTGCGCTTTACT
GAACCATGTCATGATTTATGCATAAGAAGTGAAGTAATACAATTGAAGAGTTTCATGAGA
TTACTTCAATCATGTATTACTGGTGACTCAGCTAACGTAAAACTTTCCGAACTGTCCTCC
CTGGGACTAGTGTCTAAAGATATGGCTCCAACTAAATTGACAATTAACAATCGATCTGAA
TTTCCCGCTAAAGGACTGCCCAGAACTCTTGAATCTCTCTATATTGTTGGTCTTAATCTT
TGCAATTTTCGAAGAGACATACTTCTACTAAACCATCTGGCTATTCTTGATTTGAGTAAG
AATGAAATTGAGAAAATTCCTCCTGAATTTGGGAGACTACCTAATCTATGTGAACTCTAC
TTATCAAATAATTCCTTAGGACAAAAGGAAGACTTTGACTGGAGATGGCTCTTAGGACCT
GGGATTTCTAAAAAGCTGAAACTTTTGGACCTTTGTGCAAATAAAATATCTATGCTACCC
AAAGATATTTGGAAACTTCAGAACTTGGTCACATTTAAGATAGACTTCAACAAACTGGAA
CGGCTACCACCAACTATAGGTCGCATTCAAACCCTGAGATATTTTTCAGTTTCTAATAAC
AATTTGGTTACACTGCCATGCAGTCTGATGCAATGTAGACTAGAAACTATTGATTTGTCA
TCAAATAAATTTAATTCTGATACAGTAGGTGCAAAAATGGCTAATTACACACCGTGGGAA
CTATGTGCCCACACCTTGGTACACATTGCAGCTAAAGCAGTGTTAAGAAATAAGCTCTAT
TATGCACCAAACATAGTACCATACACATTAGTAGAGCTAATGGACAATGCCAATATGTGT
GTTTGTGGTAAGCCAGTGTTGAATAATGCGAGATTTATTATAAAGGAATTTCAGCTGAAA
GATTTCTTTAGGGTTGTCGTTTTTGATAACAACGGCGATAGCTCTGTTGGTTTTGAGTGC
TTCTTTTGTTCACCAAAATGTTATGCCAGATGA
Protein sequence:
MKLQCQVEVVNRKHFSLDVRPKNKYLKSTLALGKEPKDDKGYFILHFSTVNKQGTKYRVS
DMKNVFVKFLNEGKVTLRFTEPCHDLCIRSEVIQLKSFMRLLQSCITGDSANVKLSELSS
LGLVSKDMAPTKLTINNRSEFPAKGLPRTLESLYIVGLNLCNFRRDILLLNHLAILDLSK
NEIEKIPPEFGRLPNLCELYLSNNSLGQKEDFDWRWLLGPGISKKLKLLDLCANKISMLP
KDIWKLQNLVTFKIDFNKLERLPPTIGRIQTLRYFSVSNNNLVTLPCSLMQCRLETIDLS
SNKFNSDTVGAKMANYTPWELCAHTLVHIAAKAVLRNKLYYAPNIVPYTLVELMDNANMC
VCGKPVLNNARFIIKEFQLKDFFRVVVFDNNGDSSVGFECFFCSPKCYAR