| New model in OGS2.0 | DPOGS213150 |
|---|---|
| Genomic Position | scaffold566:+ 19950-38026 |
| See gene structure | |
| CDS Length | 3444 |
| Paired RNAseq reads | 3945 |
| Single RNAseq reads | 9021 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007909 (1e-73) |
| Best Drosophila hit | CG7112, isoform B (4e-180) |
| Best Human hit | rab GTPase-activating protein 1 (5e-151) |
| Best NR hit (blastp) | PREDICTED: similar to rab6 gtpase activating protein, gapcena (rabgap1 protein) [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011312 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity GO:0005622 intracellular |
| InterPro families | IPR006020 Phosphotyrosine interaction domain IPR000195 Rab-GAP/TBC domain IPR011993 Pleckstrin homology-type IPR022164 Kinesin-like |
| Orthology group | MCL11612 |
Nucleotide sequence:
ATGGAGTTCAATGCATGTCGAACAAATGAGGTTTCGGACCCTGTAGACATTGAGTTTTAT
TCTGATCGATCCCGTACTCCTAGTCCTTCGCCCGTGTTAACAACAAATGTATGTTGTGAC
TTGGAAGACATATTGAGCGACGCAATCACAGATTCTCTCCAAACCTCTGTAAGATTAAAT
AATAGTGAGTTAACAAACCAGGAGCTGACAATCCGGCCGGAGGCTAACATTGAATCCAAC
ATTCCTGAAGGGTTGGATCTGTTCAAAGTGATATTTGAGGTTGAGAGTGATACCGATATT
CCGATACCAACAAGAATGGGTGATGTTGATGGAGCATCTGTCCAAAATCACCCACTAAAA
GACCAGGAGTCGTGTCGTCACGTGGGCGGGTCGAAGTTCTACGAGGTGGTGGACGGCGAG
GGTGACACGTGCTCCCCCACGGAGAAGCAAGACCACATGAAGCCCATAGAGAGCGATGAT
GAAGTATCAGACGTGGACCAGGAGTGCACCGTTTTCTGTGGGGTCAGTTACTTGGGGGCT
CAGAATATCGCTGACCCCAAGTCTGAGACTGACATACAGAGGATCATGAAGGAGTTGAGT
TCGATGCCAGAGAACAGAGATGGTATTGCAGTCTCCATATCCATACCGGTCTGCTCACAG
GGATTGGTCGTGTTATACCAAGCGGACACGAACAGCGTCATGACTCGCTACGCCGTGAAC
CGGATATCCTTCTACGCGCGCGGCGCCGCCGGCTCGCCTGTCGCTTCGTGCTTCGCATTC
ACCTGGTCTCATGGTGAGACGAAGGAGTCAGCTGTGTACCGCTGCCATGTGTTCAGATGT
CACATCGCAGAAGCTCAGTTGGTTCACAGAAATGCTTATATTAAATCTCAACGTTGTTTT
GCGAAGGCTTTCGAGCGTGTCCCACGGTCGATGGCGTCGTCTCTGGTCGGTGATTTGAGC
GCGGCTCCCTCAATGACCGGCTCCCTGACCGAGGGTCTGACGTCAGCGCCCCCCATGCAG
CTGATGCATGTACTGGAATGTACCGTTGATATCAAAGAGACAGACGCTAAGGGCACTTTC
AGCCATGTGCCTAAGGAGCGCTTGGGTTACAAGTTGCGAGGTGGTATCGACAAGCAGGTT
ACGATCAACGTGACGCAGGTCTCTCACAACATACAGCAAGAAACAGAGGATCCACAGGGT
TCATATAACGGTGGTCTGTATATCGAGAGGTGTTTCGGAATCCTCCTCGCTCCAGGACGT
AGCGTGAAACATTCAGACATGCAGTTACTTGAAATGGTGAGCGGTTCATCTGGCGGGTCT
GGTTGTTCGGTGTGTGCTCTCTGGAACGCTGGGGAATCGGCTCTGGCGGCATTCAACGTG
GCCAGTGGAGATGGAGCTCCGGCTTACATGTCACTGGCCTTGGACCTAGTTATTAGAGGA
ATACGGGATCCTTTGAGATTGGTGATAGAGACACCTGTCAAAGTGTTTCCACCTACCGAG
AGGTTCTGGTACTACTCCAAACGACCGTTGGTACAACAGTTCTACATTAACCTGAAAGAG
ACGGTAGATTCATTGGGTCAGCTGCAGTACGAGGTGTCCAGTGTGGAGACGTCTGGAGAG
CTGGATCGCTCCAGGCTTAACCTGCCCCTGTCGTTGTCCAGTTTACTGCCGTCTCCGCTG
TCCTCCGCTCCAGCACCTCCCTCGCCCTCAGACCCGGATTCTGATGGCGATGAACCACTA
CTAAGTGGCACTGGAGAGGTGTCAAAAGATTGCGGGGTCGATGTGCTTGAGAATTGGGCT
CAGGTGCTCAGGAGTTGGGTGGGACCTCGACCTCGTGCGTTGGAACAGCTCGTGAGAGTT
GGTGTGCCGGAGGCCCTGCGAGGGGAGGTGTGGCTCAGGCTCGCTGAAGTTGATCAGAAC
GATAAACTCATGGAGACGTATAGAACGTTAATCAGCAAGGACTGTCCATTCGAAGCAGTA
ATCCAACGCGACATAGCTCGTACGTTCCCCGCCCACGACTTCTTCCGTGAGGCCGGCGGG
CTGGGTCAGGATTCCTTGCTGAGGATGGCTCGGGCGTACGCTGTGTACGACCATGAAGTG
GGCTACTGTCAAGGGTTGAGCTTCCTCGCCGCTACACTACTGTTACACATGCCGGAGGAG
CAAGCGTTCTGTCTGTTAGTTCGTCTCATGTACGGATACGGTCTGAGAGAGTTATACAAA
GATGGCTTTGAGGCTCTATACATGAGGTTGCATCAGTTAGACAGACTAATGGAGGAGCAG
TTGAGCGAGCTTCGTGCTCACTTCCTGGAGCTGGGTGTGGAGCCGCACATGTTCGCGTCA
CAGTGGTTCCTCACTGTGTTCACTGCACGATTCCCATTGCCTCTGGTGTATCACATCCTG
GACGTGTTTCTGCTCCAAGGTGTGAACACCCTGTTCCAAGTGTCGCTGGCGCTGCTGTCG
CGAGCCAAGAAAGATCTCTTGCAACATGACTTCGAAGGTGTACTCAAATATTTCAGGGTC
ACACTGCCTAAGAAATGTCGCGCTGAGGAATCATCTCGTCAGATCATAAAACTAGCTTGC
AGCATCAAAGTGAAAAGATTACAGAAGTACCAACAGGAGTATGAGAAATTCATTAAAGAA
TCAGCAGATAAAGAGACAATTAACGTGGAGTTAGAAAGGTTAAAGGTCATCAACAATCAG
CTGACCCAAGAGAAGGAGATGCTAGAGACTCAACTCAAACAGGCTCGTGGGAATCTCGAG
GAGACACAGAAGGAGTCTGTCCACTACGCCGCCGTGTCTAGAGACTATAGGGAGATATGC
GCCAGGCTTGACAGACAACTGCATCACATACAGGATTGCGTCAAAGGTTGTGTTAATTGC
AGCGTAAAGTTAGCACAGAAGGATAATAAAGAAGAAGCGGACGAGTCTGAGAAGGACGGC
GGGGAGACTGCCAGCGAGACGGAGGCGAGGCTCAACCAGCGGGTCAGAGACCTGGAGCTG
GAACTGGCCCAGGTGAAGCTGGCTCATGTACAGGCGCAGTGCAGCAACCAGGAACTGAGT
CACCAGCTGAACGCGGCGCTGAACGAGATGCAGGCCGCCATGAACCAGAAGCAGTCGGTG
ACGCCCTGGCTCGTGCGGACCCTCGGTTCTATAATGGAGGCGGCGCAGAACAGACCGTCG
TTCCAGACTTACCTGCCTAATTTGAATCAAGAGCAGCCATCGTCTACACCTAGGCAGGGG
TCATTCAGCGGTCAGGGCCAGAGTACCGTGACCCTCGACCGGCGCGTCTCCGAGCCGTAC
AGTCCGGACGTGGTCAGGAGGAAGAAGGATCTCAACGCCAAAAGGCACTCGATGCTGGTG
GAATCGAATATCAGTAAGGATGCAAAGGAAATGAATAGACGGAGCCATGACGTCACCATC
GTAAAGAATCTGTCGATGGGTTGA
Protein sequence:
MEFNACRTNEVSDPVDIEFYSDRSRTPSPSPVLTTNVCCDLEDILSDAITDSLQTSVRLN
NSELTNQELTIRPEANIESNIPEGLDLFKVIFEVESDTDIPIPTRMGDVDGASVQNHPLK
DQESCRHVGGSKFYEVVDGEGDTCSPTEKQDHMKPIESDDEVSDVDQECTVFCGVSYLGA
QNIADPKSETDIQRIMKELSSMPENRDGIAVSISIPVCSQGLVVLYQADTNSVMTRYAVN
RISFYARGAAGSPVASCFAFTWSHGETKESAVYRCHVFRCHIAEAQLVHRNAYIKSQRCF
AKAFERVPRSMASSLVGDLSAAPSMTGSLTEGLTSAPPMQLMHVLECTVDIKETDAKGTF
SHVPKERLGYKLRGGIDKQVTINVTQVSHNIQQETEDPQGSYNGGLYIERCFGILLAPGR
SVKHSDMQLLEMVSGSSGGSGCSVCALWNAGESALAAFNVASGDGAPAYMSLALDLVIRG
IRDPLRLVIETPVKVFPPTERFWYYSKRPLVQQFYINLKETVDSLGQLQYEVSSVETSGE
LDRSRLNLPLSLSSLLPSPLSSAPAPPSPSDPDSDGDEPLLSGTGEVSKDCGVDVLENWA
QVLRSWVGPRPRALEQLVRVGVPEALRGEVWLRLAEVDQNDKLMETYRTLISKDCPFEAV
IQRDIARTFPAHDFFREAGGLGQDSLLRMARAYAVYDHEVGYCQGLSFLAATLLLHMPEE
QAFCLLVRLMYGYGLRELYKDGFEALYMRLHQLDRLMEEQLSELRAHFLELGVEPHMFAS
QWFLTVFTARFPLPLVYHILDVFLLQGVNTLFQVSLALLSRAKKDLLQHDFEGVLKYFRV
TLPKKCRAEESSRQIIKLACSIKVKRLQKYQQEYEKFIKESADKETINVELERLKVINNQ
LTQEKEMLETQLKQARGNLEETQKESVHYAAVSRDYREICARLDRQLHHIQDCVKGCVNC
SVKLAQKDNKEEADESEKDGGETASETEARLNQRVRDLELELAQVKLAHVQAQCSNQELS
HQLNAALNEMQAAMNQKQSVTPWLVRTLGSIMEAAQNRPSFQTYLPNLNQEQPSSTPRQG
SFSGQGQSTVTLDRRVSEPYSPDVVRRKKDLNAKRHSMLVESNISKDAKEMNRRSHDVTI
VKNLSMG