| New model in OGS2.0 | DPOGS200364 |
|---|---|
| Genomic Position | scaffold1227:- 24782-26365 |
| See gene structure | |
| CDS Length | 1584 |
| Paired RNAseq reads | 289 |
| Single RNAseq reads | 683 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005666 (0.0) |
| Best Drosophila hit | mutagen-sensitive 309 (4e-80) |
| Best Human hit | ATP-dependent DNA helicase Q1 (6e-136) |
| Best NR hit (blastp) | putative RecQ Helicase [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | putative RecQ Helicase [Heliconius melpomene] (0.0) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0005634 nucleus GO:0004386 helicase activity GO:0000166 nucleotide binding GO:0003677 DNA binding GO:0005524 ATP binding GO:0006310 DNA recombination GO:0003676 nucleic acid binding GO:0008026 ATP-dependent helicase activity GO:0006281 DNA repair GO:0006260 DNA replication GO:0043140 ATP-dependent 3'-5' DNA helicase activity |
| InterPro families | IPR004589 DNA helicase, ATP-dependent, RecQ type IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL16871 |
Nucleotide sequence:
ATGCCTACCGGCGCTGGTAAAAGTCTTTGCTATCAACTGCCAGCTCTAATAAAGCCAGGT
ATTACTATTGTAATATCTCCTCTAGTTTCTTTGATGGAAGATCAAGTGAGATCCTTAACA
AATAAAAATATACCGGCGAAACTTATGACAAGCACCAGTTCTAAAGCAGAGACTACAGCA
ACACTAAATGTTCTTAAAGATAAAAACACAGAGGTCAAACTGTTGTATGTAACTCCTGAG
AGACTTGCGAAGAGTAAGAGATTCATGTCAGCACTTCAAAAATGTCATGCTGAAGGTAGA
CTGCAGAGAATTGCTATAGATGAAGTTCATTGCTGTTCCCAATGGGGACATGACTTCAGA
CCTGATTATAAGTATTTAGGAATACTGTCTAATATGTTTCCCGGAGTTCCTATCTTAGGA
TTAACAGCTACAGCTACATCTCATGTATTGAATGATGTTCAAAAGATCCTCAATATAACT
GGCTGCTTAGTAATTAAATCAACTTTCAATAGACCAAATTTATATTATAAAATACTAGAA
AAACCTACATCACAAGAAGATTGCTTGACCATACTTGAGAAGCTCTTAAAATATAGATAT
AGGGGGGAAAGCGGAATTATCTATACCAACAGTATTAAAGATTCTGAAGAAATAGCTGAA
GGTTTGAAGAAGAGGAATTTAAAAATAGCATGTTATCATGCAAATTTAAGTGCAGAAATA
AGGTCAAAAGTACACATTAGGTGGCATGAGAAAAGTCTTCAGGCAATTGTAGCTACAGTG
GCTTTTGGTATGGGAATTGATAAACCGGATGTAAGATTTGTTATACATCATACAATAAGT
AAATCTATGGAAAATTATTATCAAGAGAGTGGTAGAGCTGGAAGAGATGGTCTGCGGGCA
GAATGTGTAACATTGTATAGAATGCAAGATGTTTTCAAAGTTAGTACTATGGTGTTTTCC
TCGGTGGGGAGCTTGGATCATTTATATGGCATGGTGAAATATTGTCTTAATGGAACATTA
TGTAGACGGCAATTGATCGCTGAACATTTTGATGAAGATTGGGGAGATGCAGATTGTAAT
AAGATGTGTGATGTTTGTTCTAATCCTAATGTAAATAGTAAAGAAATATCTCTTGAAATG
CACTGCAAGATTCTGGATAGTATTATTAGCAATGCAGAAAAACAAGACACAAAACTCACA
GCACAGAAGTTACTTGATGCTTGGTATCTGAAAGGTCCAGTACCTCTTAGACATAAAGGC
AAAGAACCAAATTTTTCCAGACTTGTAGGTGAAGATGTAATAGCATTTTTGCTAACCCAA
GGCTATTTAATAGAAGACTTTCATTTTACAGCATATTCAACAATAAGTTACATAAAAAAA
GGTCCGAATATGGAAGCCATTAATGATATTAATTTTGAATTGAAAATGCCCGTTAGGAAA
TATTATGAATTTCATTTAGACAGGCCGGCACCAAGAGAATATGAATCTTTAGAAGGTAAA
CCTGAAATCAAAGAATCGAGAAAAAGAAAAATTTCTGAAGAGCATGATACAAGAAAATTG
AAAACCGTCATAATTGATGATTAA
Protein sequence:
MPTGAGKSLCYQLPALIKPGITIVISPLVSLMEDQVRSLTNKNIPAKLMTSTSSKAETTA
TLNVLKDKNTEVKLLYVTPERLAKSKRFMSALQKCHAEGRLQRIAIDEVHCCSQWGHDFR
PDYKYLGILSNMFPGVPILGLTATATSHVLNDVQKILNITGCLVIKSTFNRPNLYYKILE
KPTSQEDCLTILEKLLKYRYRGESGIIYTNSIKDSEEIAEGLKKRNLKIACYHANLSAEI
RSKVHIRWHEKSLQAIVATVAFGMGIDKPDVRFVIHHTISKSMENYYQESGRAGRDGLRA
ECVTLYRMQDVFKVSTMVFSSVGSLDHLYGMVKYCLNGTLCRRQLIAEHFDEDWGDADCN
KMCDVCSNPNVNSKEISLEMHCKILDSIISNAEKQDTKLTAQKLLDAWYLKGPVPLRHKG
KEPNFSRLVGEDVIAFLLTQGYLIEDFHFTAYSTISYIKKGPNMEAINDINFELKMPVRK
YYEFHLDRPAPREYESLEGKPEIKESRKRKISEEHDTRKLKTVIIDD