| New model in OGS2.0 | DPOGS202269 |
|---|---|
| Genomic Position | scaffold490:- 25592-27071 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 898 |
| Single RNAseq reads | 2064 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004986 (0.0) |
| Best Drosophila hit | CG17565 (3e-105) |
| Best Human hit | protein farnesyltransferase subunit beta (2e-100) |
| Best NR hit (blastp) | farnesyltransferase beta subunit [Glossina morsitans morsitans] (8e-120) |
| Best NR hit (blastx) | PREDICTED: similar to farnesyltransferase, CAAX box, beta [Tribolium castaneum] (3e-123) |
| GeneOntology terms | GO:0005968 Rab-protein geranylgeranyltransferase complex GO:0004663 Rab geranylgeranyltransferase activity |
| InterPro families | IPR001330 Prenyltransferase/squalene oxidase IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid |
| Orthology group | MCL15701 |
Nucleotide sequence:
ATGGAGAACTATATTAGATGTTTCGACGATGTTTCCAAAGCTGCTTACGATGACGAAGAT
ATTGTGACAAACACATCATCAGAACAGGTTCATGTTGAAAATGTAATCCTGAGGATCTAT
AAGCAGTTTGAGGAAAAGGCATCTGTTGATCCTGATCTCCCAAAACTTAAGAAAAATTCT
CATGCAAATTATCTTAAAAATGTCTTGATGCAATTACCACAGTCCTATTCCTGTTTAGAT
GCTAGCCGACCATGGCTTATATATTGGATATTGCATGGTCTTTGGTGCTTAAAAGACCTG
CCAGACGCATCAACCTTATCAAAAGTAGTAAATTTTTTGGCCAAATGCCAAAACAAGGAT
GGTGGATATGGAGGTGGTCCAGGTCAATTCTCACACCTCGGGGCTACTTATGCAGCTGTA
AATGCTCTTAGTATAATTGGTACAGATGAAGCGTATAATTCAATTGACCGGAGTGCCTTG
CAAAATTTTATATGGTCGGTCAGAGAGGTTGATGGTTCTTTTGCACTTCACAGAGGTGGA
GAACAGGACATAAGAGGTGCATACTGCGCCATTAGCGTCGCCAAAGTAACCAATATTTAT
ACTGACATGTTATTTGATAAGACGGCAGAATGGATTGTTAGTTGTCAGAGTTATGAAGGA
GGATTCGCCGGGTATCCGGGGATGGAGGCGCATGGGGGATATGCATACTGTGGTATTGCT
TCATTGGCTTTATTAAATCGAACTCAGCTCTGTGATGTAGATGCACTTCTGAGGTGGTGT
GCAAACAAACAGACAAGCTTGGAGGGTGGTTTCCAGGGAAGGACCAATAAACTTGTTGAT
GCCTGCTACTCCTTCTGGCAAGGTGCTATTTTTCCTATCATAAGTGCAATACTATCTCAA
GATAACAAGGAAATGATAGAAACAGTACTATTCAATCAGGGTGCCTTACAAGAATATATC
TTAGTTTGCTGTCAAGCTTCCGAGGGAGGACTTATAGACAAGCCAGGAAAGTCTCGTGAT
ATATATCATACTTGCTATACCCTTAGTGGTTTGTCAATCGCCCAGCATGGAACCGGTGCT
ACCAATCCTTACACCGTGGGATCGCCTCACAATGAACTGAACAGGACCCATCCGCTGCAT
AACATTGGTCCACATCTTGCATATAACGCTCTGCACTACTTTATTCGACACCCTCCGCCA
GTGAAAGATAAGAATTAG
Protein sequence:
MENYIRCFDDVSKAAYDDEDIVTNTSSEQVHVENVILRIYKQFEEKASVDPDLPKLKKNS
HANYLKNVLMQLPQSYSCLDASRPWLIYWILHGLWCLKDLPDASTLSKVVNFLAKCQNKD
GGYGGGPGQFSHLGATYAAVNALSIIGTDEAYNSIDRSALQNFIWSVREVDGSFALHRGG
EQDIRGAYCAISVAKVTNIYTDMLFDKTAEWIVSCQSYEGGFAGYPGMEAHGGYAYCGIA
SLALLNRTQLCDVDALLRWCANKQTSLEGGFQGRTNKLVDACYSFWQGAIFPIISAILSQ
DNKEMIETVLFNQGALQEYILVCCQASEGGLIDKPGKSRDIYHTCYTLSGLSIAQHGTGA
TNPYTVGSPHNELNRTHPLHNIGPHLAYNALHYFIRHPPPVKDKN