| New model in OGS2.0 | DPOGS205979 |
|---|---|
| Genomic Position | scaffold622:+ 21645-24786 |
| See gene structure | |
| CDS Length | 1494 |
| Paired RNAseq reads | 644 |
| Single RNAseq reads | 1570 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009408 (3e-165) |
| Best Drosophila hit | CG12267 (3e-69) |
| Best Human hit | DNA-directed RNA polymerase III subunit RPC3 (2e-52) |
| Best NR hit (blastp) | DNA-directed RNA polymerase III, 62-kS-subunit, putative [Aedes aegypti] (3e-102) |
| Best NR hit (blastx) | DNA-directed RNA polymerase III, 62-kS-subunit, putative [Aedes aegypti] (4e-91) |
| GeneOntology terms | GO:0005666 DNA-directed RNA polymerase III complex GO:0006383 transcription from RNA polymerase III promoter GO:0003899 DNA-directed RNA polymerase activity GO:0003677 DNA binding |
| InterPro families | IPR008806 RNA polymerase III Rpc82, C -terminal IPR013197 RNA polymerase III subunit RPC82-related, helix-turn-helix |
| Orthology group | MCL14791 |
Nucleotide sequence:
ATGTCTCGACAACTTGGTAGAGTAGTTTCGCAAATTTTGAATAGGTATTTTGGAGAAATC
GTCGAAAAAGTGGGAAACGATCTGTTCATGTATGGTTGTAAACCCATGGGTATGATAATA
AAGAGTACAGGCCTACCTCGGACACAGGTCATCGAGAGTTTGAGAACTCTCCTTAAATTT
GATCTAGCTACATTTGAAGCTAAAGATGTTATTGTTGATTACAAATTACAGCCAGAAAAT
ATATTACTGCTCATACGATACCCAAGGTATCTTTTGCAAATGAAAACTAAGTATGGCAGT
GAGGCTGAAATGTTGGTTGAGGAATTGTTACAACAGGCATCTTGTACTGCAACGGTACTA
ATAGTCAGCGTCATGAACAAATACAAAGACGATAAGGAAAAGAATTTAAATATAGTGAAA
TTAAAAGACACATTCATTAGTCTGGCGACTGCAGGATATATTCAGCAAGCTCCGGTGGCA
GAAATTAACAATGAAATACCTGTTTTAGTACCCGTGGCCACCATAGTACCAGATTTAGAT
GTTAGAGAATTAATTAATGCTATGAACAGCAATCTCAACAATGTTAGTGACAATATTTAC
TGGAAAGTAAACTATGATAGATTCCACCTTGATTTCCGAGATGAAGTTATGATAAAGGCA
GTGACACGTCGCATTGATGATAATGCCGGGGAATTGTTAAAGTTGATGTTAGAGCAGATG
TATTTATCGTCATCATCGTGGGCATCTGACTCGTCACCGGTCCCGCTAACTGATCTAAAG
GATGGATGTCAGAGGATCGGAGAGAATATGAAAAACCATGTGGAACAATATTTAAGAGTT
ATCGAGGAAAGTACAGGATTCATTCGTCGTACGGGTGACGCCGGGGGCGGGCAATATAGT
GTGAGGATCCAACACGCTCTGATACAACTCGTGGAAGCTGTGTGTGATCATACGGTCACT
GAGAGACTCGGGGGAAAAGCAGCCAGAATATTTAGATTGATAAGATCCAAAAAGTACTTA
GAAGAGGACGATATACAGAAGAATGCGATGCTACCCAACAAGGAGTGTAAGGAATTGACT
TACAAATTGTTGGAGGAACATTTTATTAGTGTTCAGCCGATGAGAAAAACAGCTTCAGCG
GGCGGTATGGCCAAAGCGATATATTTATACCACGTCAAGTTACATGATGTAGCACACGTC
GTCCGTGACATGTGCTATCGGTCGCTCCACAACGTGATGTCGGTGTCGCGTCACAGGCGC
GTGTTAAACGCGCGTCTCTTGGAAAAAAAACGCCGCGTCCGGACGATCGTGCACGGCATG
AGGCTTAGAGGGGAACCCCAGCAGAATATTGACGATGTGCTGGATACCCTGACTCCGCCG
GAAGTGACGTCAGCGGCGGAAGCGGAGCGTCGCCTTAGTACGCTCGCAGCATCCGAGCTC
CACCTGGACCGCGCCCTGTTCATACTCACCAGCTACTTCACGTACCAGAGATGA
Protein sequence:
MSRQLGRVVSQILNRYFGEIVEKVGNDLFMYGCKPMGMIIKSTGLPRTQVIESLRTLLKF
DLATFEAKDVIVDYKLQPENILLLIRYPRYLLQMKTKYGSEAEMLVEELLQQASCTATVL
IVSVMNKYKDDKEKNLNIVKLKDTFISLATAGYIQQAPVAEINNEIPVLVPVATIVPDLD
VRELINAMNSNLNNVSDNIYWKVNYDRFHLDFRDEVMIKAVTRRIDDNAGELLKLMLEQM
YLSSSSWASDSSPVPLTDLKDGCQRIGENMKNHVEQYLRVIEESTGFIRRTGDAGGGQYS
VRIQHALIQLVEAVCDHTVTERLGGKAARIFRLIRSKKYLEEDDIQKNAMLPNKECKELT
YKLLEEHFISVQPMRKTASAGGMAKAIYLYHVKLHDVAHVVRDMCYRSLHNVMSVSRHRR
VLNARLLEKKRRVRTIVHGMRLRGEPQQNIDDVLDTLTPPEVTSAAEAERRLSTLAASEL
HLDRALFILTSYFTYQR