| New model in OGS2.0 | DPOGS200052 |
|---|---|
| Genomic Position | scaffold511:- 107929-112314 |
| See gene structure | |
| CDS Length | 1260 |
| Paired RNAseq reads | 481 |
| Single RNAseq reads | 1192 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002402 (0.0) |
| Best Drosophila hit | CG2774 (4e-11) |
| Best Human hit | sorting nexin-4 (9e-88) |
| Best NR hit (blastp) | PREDICTED: similar to Sorting nexin 4 [Nasonia vitripennis] (1e-129) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000603 [Tribolium castaneum] (4e-125) |
| GeneOntology terms | GO:0005515 protein binding GO:0005737 cytoplasm GO:0007154 cell communication GO:0035091 phosphoinositide binding |
| InterPro families | IPR001683 Phox homologous domain IPR015404 Vps5 C-terminal |
| Orthology group | MCL17637 |
Nucleotide sequence:
ATGTCGGCAGATAGCTCGCCGATAAAATCTTCAAGATCTCTGAATAAAATTGAAACAGTG
GAAGACTTTGAAAATCAAGACACATTGTTAAAACATGTTGATATATCGATTGTGGAGTCT
GAGAAGCGAGCTAACGGCACCTTGCATGTGCGAGATCATTACACTGTATATTTAATCGAT
CTCAAAGTCACAGATCCTGAATACAATATAGTGCAATCAAAAATCAGTACTATATGGAGA
AGATACACCGAGTTCGAGCAAATTCATGACTATTTACAGGTTACATATCCACATGTAGTA
ATTCCACCTCTGCCAGAAAAAAGGGTGTTGTATGCATGGAGGAAATCAGATACAACAGAT
CCCGAGTTTGTTGAGAGAAGGCGGGCTGCACTTGAGAATTTCTTACTAAGAGTGGCCTCT
CACCCCAGACTGTGTTTTGACGATCAGTTTATAAATTTCCTTCAACAGGAACATGGATGG
AGAGAAACTATCACGGACAGTGGATATCTCTTACAAGCGGAGAACAAATTAAAATCATTA
TCAGTATCCATAAGACTGAAGAAGCCGGATCCAGAGATAGAGAGCGTTAAAAATTATGGG
AAACAACTTGAAACTAATTTAGGAAATTTTCTATACACAAGATCAAAAATTATAGAAAAA
AATTACGCCCTTTGTAAGCTACACGCTAACTATGGCAAGCTGTTCAGTGAGTGGAGTGTT
ATAGAGAAAGAGATGGGCGATGGATTACAAAAGGCTGGACATTATTTTGATTCGATAGCG
GATTCCATAGACTCAGTGGCGGAAGACGAAGAGCAATTAGCAGATCAGCTTAAAGAGTAT
TTGTTCTATGCTGCAGCGCTGCAGCAACTGTGCGCTAACCATGAAGCGCTGCAGCGGGCG
CTGGAAAACGCACAGGACGCTCTCAATAACAGGATATCTGAGCGTGGTCGTGCGGCTGCC
GGCAAGTCTGGCATCATGTCTCGCTTGTTCGGTACCACCGAACCCGACATAGTACGCGAC
CACGCCACGAGAGCCCTCGACCACAAGATACACACAGACAGAGACAATATCGACAGAGCC
AAGAGAGATCTTGAAGAATTTACCAAAAAGGCTATGGTTGAGATTGAATACTTCCAAAAA
CAAAAAGATAAAGACTTGCACGAGTCGCTCGTTGCCTTTATAACACTACAAGTAAAAGCA
GCGAAAAAGAATTTGCAGGCATGGACGCAAATCCGTGAATGCATTCAAAACATGCCATGA
Protein sequence:
MSADSSPIKSSRSLNKIETVEDFENQDTLLKHVDISIVESEKRANGTLHVRDHYTVYLID
LKVTDPEYNIVQSKISTIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTD
PEFVERRRAALENFLLRVASHPRLCFDDQFINFLQQEHGWRETITDSGYLLQAENKLKSL
SVSIRLKKPDPEIESVKNYGKQLETNLGNFLYTRSKIIEKNYALCKLHANYGKLFSEWSV
IEKEMGDGLQKAGHYFDSIADSIDSVAEDEEQLADQLKEYLFYAAALQQLCANHEALQRA
LENAQDALNNRISERGRAAAGKSGIMSRLFGTTEPDIVRDHATRALDHKIHTDRDNIDRA
KRDLEEFTKKAMVEIEYFQKQKDKDLHESLVAFITLQVKAAKKNLQAWTQIRECIQNMP