| New model in OGS2.0 | DPOGS204780 |
|---|---|
| Genomic Position | scaffold405:- 101389-109861 |
| See gene structure | |
| CDS Length | 2646 |
| Paired RNAseq reads | 638 |
| Single RNAseq reads | 2756 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013718 (0.0) |
| Best Drosophila hit | mutagen-sensitive 301 (1e-164) |
| Best Human hit | helicase POLQ-like (7e-149) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC001346 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | GE21661 [Drosophila yakuba] (2e-168) |
| GeneOntology terms | GO:0007294 germarium-derived oocyte fate determination GO:0008298 intracellular mRNA localization GO:0048477 oogenesis GO:0009949 polarity specification of anterior/posterior axis GO:0030717 karyosome formation GO:0009951 polarity specification of dorsal/ventral axis GO:0006417 regulation of translation GO:0030532 small nuclear ribonucleoprotein complex GO:0005682 U5 snRNP GO:0004386 helicase activity GO:0009994 oocyte differentiation GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity GO:0016321 female meiosis chromosome segregation |
| InterPro families | IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR001650 Helicase, C-terminal IPR014001 DEAD-like helicase |
| Orthology group | MCL12628 |
Nucleotide sequence:
ATGAACGGTTTCCGAAGCACTCTCGGCTCCTACACACTGTACAAGGACACTGCACTGCAC
AGCACGGCACTTACGTCGCACGGGTTGAAGACGGTCACTCAGTCACTCGGCACGGGTACA
GGACCGGCAGCAAAGCGACGTTGGAATGTGGAGTCCGCGGCGACCGAGGCGGCTCTGGCC
GGCGCTGGCTGCGTCCGCGGCGCCGCGACGGCCCTCGCCCCTCCCACACCGACCCCTCGG
GGTATATTATTTGAAACTAAGGACTCATTTTTACTAGACATAAGAGAAAGTGGTATCTTA
GCGGCCGAGACAGAAGAAAAATCCATTTTTGTACCAAAAGCAAATCCAGTTACAAAGCAT
GAGGGTTTTTATGGCTTGCCAATGATTGTCAAAGGATTGTTTAAAACTTATAGAAATATT
GAACAGTTGTATGATTGGCAAGAGGAATGCCTTAATCTGCAGGCTATCAGAGATAGACTT
AATTTGATCTATGCTCTACCGACAAGTGGCGGAAAAACTCTAGTTGCTGAAGTACTTATG
TTGAGAGAAGTGATCAATAGAAAACATAATGCCATATTTATACTGCCCTTTGTTGCTATA
GTGCAGGAAAAGATATGGGCTCTGGCACCATTTGCCCTGCAACTGGAGTTCTTAGTAGAA
GAATATGCAGGAGGAAAGGGTCACCTGCCACCAAAGAAAAGAAGAAAAAAGAACACCATA
TATATAGCCACCATAGAAAAGGGGTTGGCGCTAGTCAGGAGTTTGATAGAACTCAACAGA
CTCGATGAAGTTGGACTCATTGTTGTTGACGAATTGCATCTCATAGGTGAGGCGGGTCGA
GGCAGTACGCTGGAAACATTACTGACTACCGTCATTTTCGCTAATAAAGGAATCCAGATA
GTCGGAATGAGTGCAACGATAGGTAATCTGCCAGATCTAGGACGATTTTTGAAGGCTGAG
ATATTTGAGAAGCAGTTTCGGCCAGTGGAGCTCAAGGAGTACGTGAAGCTGGGAGACGTG
CTGTACAGGCTCCGCGAGGATATGGAACTGGTGGTGGAGAGGAAACTGGCTTATGATTAC
TCTCCGGCAGCACTGGCCCTGGACCCGGACTTCCTGGGCGGGCTGGTGTCGGAGGTGGTG
CCCGGGGGATCGTGTCTAGTGTTCTGCCCCACTAAGAGGAACTGCGAGAACGTGGCCGCC
TTACTGTGTCGGTTACAGAGAAAAGACATGTCCCAACATCGTACTGAGGAACGTAGCGCT
TTGCAACGCTCTCTGTGTAACGAGGGCGCGGCCCCGGGGCTGGTGGGTGCTGCGGCAGCG
GGAGTCGCCTTCCACCACGCGGGGCTCTCGGCTGACGAGAGGTCGCTCATTGAAAATGCC
TTCAGATCCGGCGTGATATCAGTCATATGTTGCACGTCAACTCTAGCGGCGGGGGTCAAC
CTGCCGGCGAGGCGGGTCATAGTCCGGGCTCCTCTAGTCGGTCGCCAGTTGCTCTCGATG
GGGTCGTACAAACAGATGGTGGGGAGGGCGGGGCGGGCCGGCGTCTGCGAGGACGGTGAG
AGTATCCTCATCGTCTCTCCTCGTGAATGGCCCGCGGTGCGAACACGGCTGTCCGAGGGT
ATTCCTCCAGCTCTGAGTTCTCTCAAGACGTCAATAGACGAGCTGCTGCTCAGCGCTGTT
GCGCTCAATTTATGCCGAGACCGAAAAGCGCTTAAAGCCCTTCTGGAGTCTACGCTACTG
GCTATAGCGCCGGAGGAGGGTTCCGTGGACATTGATGAAGTGTGCAACGAGTCCATCGGC
TCGTTGTTGAGGAGTGAGGCGCTCCAGGTGGTGGGTCGGGACGGACACGTGAAGGAAGAC
GAGCTACAGCTGGCGGTCAGCACGGTCGGTCGGGCGGCCGTTAAAGGTTGTTTAGATCTC
ACGACAACGAAGCAGCTCATGAAGGAGTTGGAGCAAGCGTCTCGGGGTCTGGTGTTGATG
GGCTGTCTCCACTTACTATTCCTGGTGACTCCGCAGGAGGTGTCTATAAGACCCGACTAT
AGACACTACTACACACTGTACAGTAACCTGGACGAGGAGGGGCTGCAAACGGCCAGGGTC
CTCGGCATCACGGAGGTCAACGCTGTCAGAATGATGACAGGGAAACCTATTACGAACGTT
TCAGAGAGCGTCTTAAACAGGTTCTACGTGGCGTTAACGTTACGAGATCTCTACAGACGA
ATGCCGTTCGCCGCTGTCTCGGATAAGTACAACATCCCCAAAGGTACTATCAGTAGTCTT
TTATCGTCGGCGGTGGCTCTCTGTTTGGGAGCCCAGCGGGCGTGTGTCGAGTTGGGTTCT
TGGACGTACGGAACACTGTTCGATGAACTCGCTTCACGACTCAAGCATTGCGGCGCACCG
GAACTCGAGGCGCTCATGGAACTACCCGCAGTTAAGAAGGGTCGCGCGCTCCAACTACAC
CGAGCTGGTTTCCGTCGCCTGGAGGACGTCGCCCGCGCCGCGCCCGACGACCTCGTGGCC
GCCGTCACTCACCTGTCACGGACCGCCGCCAACCACCTCATCAGTGCTGCCAGGGTGTTA
CTCATTGAAAAGGTGGAAAACCTCCGCGCGGAGGCTGAAGACGTTATGGAAGGATTGAAT
TTATGA
Protein sequence:
MNGFRSTLGSYTLYKDTALHSTALTSHGLKTVTQSLGTGTGPAAKRRWNVESAATEAALA
GAGCVRGAATALAPPTPTPRGILFETKDSFLLDIRESGILAAETEEKSIFVPKANPVTKH
EGFYGLPMIVKGLFKTYRNIEQLYDWQEECLNLQAIRDRLNLIYALPTSGGKTLVAEVLM
LREVINRKHNAIFILPFVAIVQEKIWALAPFALQLEFLVEEYAGGKGHLPPKKRRKKNTI
YIATIEKGLALVRSLIELNRLDEVGLIVVDELHLIGEAGRGSTLETLLTTVIFANKGIQI
VGMSATIGNLPDLGRFLKAEIFEKQFRPVELKEYVKLGDVLYRLREDMELVVERKLAYDY
SPAALALDPDFLGGLVSEVVPGGSCLVFCPTKRNCENVAALLCRLQRKDMSQHRTEERSA
LQRSLCNEGAAPGLVGAAAAGVAFHHAGLSADERSLIENAFRSGVISVICCTSTLAAGVN
LPARRVIVRAPLVGRQLLSMGSYKQMVGRAGRAGVCEDGESILIVSPREWPAVRTRLSEG
IPPALSSLKTSIDELLLSAVALNLCRDRKALKALLESTLLAIAPEEGSVDIDEVCNESIG
SLLRSEALQVVGRDGHVKEDELQLAVSTVGRAAVKGCLDLTTTKQLMKELEQASRGLVLM
GCLHLLFLVTPQEVSIRPDYRHYYTLYSNLDEEGLQTARVLGITEVNAVRMMTGKPITNV
SESVLNRFYVALTLRDLYRRMPFAAVSDKYNIPKGTISSLLSSAVALCLGAQRACVELGS
WTYGTLFDELASRLKHCGAPELEALMELPAVKKGRALQLHRAGFRRLEDVARAAPDDLVA
AVTHLSRTAANHLISAARVLLIEKVENLRAEAEDVMEGLNL