| New model in OGS2.0 | DPOGS206264 |
|---|---|
| Genomic Position | scaffold1055:- 6872-12062 |
| See gene structure | |
| CDS Length | 1623 |
| Paired RNAseq reads | 341 |
| Single RNAseq reads | 823 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010797 (0.0) |
| Best Drosophila hit | Methionyl-tRNA synthetase (2e-123) |
| Best Human hit | methionyl-tRNA synthetase, mitochondrial precursor (1e-102) |
| Best NR hit (blastp) | PREDICTED: similar to methionine-tRNA synthetase [Tribolium castaneum] (3e-153) |
| Best NR hit (blastx) | PREDICTED: similar to methionine-tRNA synthetase [Tribolium castaneum] (1e-141) |
| GeneOntology terms | GO:0006431 methionyl-tRNA aminoacylation GO:0004825 methionine-tRNA ligase activity GO:0005739 mitochondrion GO:0005524 ATP binding GO:0007040 lysosome organization |
| InterPro families | IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR015413 Aminoacyl-tRNA synthetase, class I (M) IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR014758 Methionyl-tRNA synthetase |
| Orthology group | MCL13420 |
Nucleotide sequence:
ATGAGATTAACTTTAAGATTATTGTCTTCCGTGATAAATAAAAGACCATTCTATATTACA
ACACCAATCTTCTACGTGAATGCCGCTCCACATCTAGGTCATCTGTATACAGCAGTTGTT
GCAGATGCAATACAGAGGTTCGAGAAGTTAACAGATCCCAACTGCAATGTAAAATTCAGC
ACTGGCACGGATGAACATGGAACAAAAATACAACAGGCTGCGGCTAAATCAAACAAGTCA
CTAATAAACTACTGTGATAATATATCCAAAGAATATAGAGAATTATTCGATGAATATGAA
GTGGAATACACAGACTTCGTCAGGACGACGGAGGAGAGACACAAGAAAGCCGTTTCTCAT
TTCTGGAGAAAATTAGTTAAAAATGATTACATATATAAAGCAAAATATGCTGGATGGTAC
AGTGTAAATGACGAAGCATTTGTGCCGGAATCACATACAAGGGATGAAGTCACAGAAAAT
GGGAAAATCAAAGTATCAATAGAGTCCGGTCACAGAGTAGATTGGACGGAGGAAACAAAT
TACATGTTCAGATTAAGTGCATTCAAGACACATCTACACGAGTGGCTCAGTACAGACGGT
GTGATCGTTCCTACAAAGTTCCAAAAACAGTTGCAAGATTTGGTGTCGAAAGACGCCTAC
CTTCCTGATATATCAGTGAGCAGACCAGCTGATAGAGTGCATTGGGCTATAAGGGTACCT
GATGATGAGGAACAAAGTGTGTACGTGTGGTTGGATGCTCTAGTAAATTACCTCACGGTT
TGTGGTTATGGGGACGGAGATTGTGCGGGATGGCCAGCCGACGTGCAGGTTGTTGGGAAA
GATATATTGAAGTTCCACGGTATCTACTGGCCGGCATTTCTAATGGCGTCCGGGCGTCAC
CCGCCACGCCGGCTCGTGTGTCACGCTCATTGGACTGTAGATGGATCTAAGATGTCCAAA
TCGTTAGGCAACGTGATCTCGCCTCGAGAGACGATCGTGCCTGGCGCACTGCGGTACATG
ATGCTAAGGGAGGCTACTCTAGCTGACGACGCCAATTTCAGCTCGGTCAAGTTGCTCAAC
ATTGCTAACTCTGAGTTGGCGGACACGCTCGGTAACCTCGCCGCGCGCGTCACGGGCACC
GCTCTAAACCCAAGAGAGGAATTCCCAGCCAATAAGGGATTACAACATGAATTGGCTTCG
CGACTGATGGACCAAATTGATAGATTACCCGACAAATGCCACACTCATTACAGCAACTAT
CAGTTCTACAAAGTGGTGGACGCCGTTATGAAAGTCCTGCATCTAGGAAACCTGTTCCTC
GAGACTATCAAACCCTGGGAACTGAAGAAGATGAAACGGCAAGAGGAACTGGACGCCGTC
ATTCATATCACGATGGAAGCCTTGAGGATTTGCTCGATCATTTTGCATCCTATAATTCCG
TCGCTGTCCAATAAGCTGCTAGACAAACTTGACGTACCGAAAGATAGAAGATTGTGGCGA
CACTGCCAAGGAGCGTGGAGAAATGGGGCGATGGAGACAAGGAAAATCCAAAGTGGAAAA
TTCGTGCTGTTCCCAAGAACATACGTGGATAAAAAAGACGCTAAGAAGAAGGCTAAATCT
TAA
Protein sequence:
MRLTLRLLSSVINKRPFYITTPIFYVNAAPHLGHLYTAVVADAIQRFEKLTDPNCNVKFS
TGTDEHGTKIQQAAAKSNKSLINYCDNISKEYRELFDEYEVEYTDFVRTTEERHKKAVSH
FWRKLVKNDYIYKAKYAGWYSVNDEAFVPESHTRDEVTENGKIKVSIESGHRVDWTEETN
YMFRLSAFKTHLHEWLSTDGVIVPTKFQKQLQDLVSKDAYLPDISVSRPADRVHWAIRVP
DDEEQSVYVWLDALVNYLTVCGYGDGDCAGWPADVQVVGKDILKFHGIYWPAFLMASGRH
PPRRLVCHAHWTVDGSKMSKSLGNVISPRETIVPGALRYMMLREATLADDANFSSVKLLN
IANSELADTLGNLAARVTGTALNPREEFPANKGLQHELASRLMDQIDRLPDKCHTHYSNY
QFYKVVDAVMKVLHLGNLFLETIKPWELKKMKRQEELDAVIHITMEALRICSIILHPIIP
SLSNKLLDKLDVPKDRRLWRHCQGAWRNGAMETRKIQSGKFVLFPRTYVDKKDAKKKAKS