| New model in OGS2.0 | DPOGS215867 |
|---|---|
| Genomic Position | scaffold1009:- 59812-68340 |
| See gene structure | |
| CDS Length | 4257 |
| Paired RNAseq reads | 1419 |
| Single RNAseq reads | 3418 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000415 (3e-08) |
| Best Drosophila hit | claret (1e-25) |
| Best Human hit | probable E3 ubiquitin-protein ligase HERC4 isoform b (2e-19) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP004229-PA [Acyrthosiphon pisum] (6e-59) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP004229-PA [Acyrthosiphon pisum] (1e-51) |
| GeneOntology terms | GO:0006727 ommochrome biosynthetic process GO:0006856 eye pigment precursor transport GO:0008057 eye pigment granule organization |
| InterPro families | IPR000408 Regulator of chromosome condensation, RCC1 IPR015943 WD40/YVTN repeat-like-containing domain IPR009091 Regulator of chromosome condensation/beta-lactamase-inhibitor protein II IPR011046 WD40 repeat-like-containing domain |
| Orthology group | MCL31060 |
Nucleotide sequence:
ATGGATTTCTCTGGTTTATTTAAATTAGATGTTCTTTTACAACAAGATATAGCAAACCAC
ACTTTTTACGAAGTTGGATTAAAAAAATACCTGGCAGTCTCTAATAACAAAGAATTGATA
TTTTTGTACATAAATGCTCAGTCCGAAAGATTCGACAGCATATATGACTGGGATTTTCTT
GATAATCCAGTTTATTGCATGTGTTTTGAACCCAGCGGAACTTGGGTTTTGATTGTCAGT
GATGAAAAAGTATTGCTAGTGCCATTTCTTCCTTTGTTCATCCCACAGTACACATATGAC
TGTAAATGGTCCCTTTCAAGTGTCACAGTTCTGCCCCTTCTCGATATACCACAACCGACA
TCTGTTGTTTGGTGGCTTACAAAGGAATCCGAAAATATTATTATCATATCGTCTAAGAGT
GGAATCATAACTTTTTATTCCTTGGAGTCACAAAGTGTTGTTGGCGAAACAAGAGTGTCG
GGGGAGGTTATAGATTTACAAATTTGTTTTGACGATTCCCTTGACTTGCTGGCTCTACTC
ATTTCCAAAGGACCAACACAGCAATGGAAATTGGTATTAGAACATAGATCCCTTGGGTAT
AACTGGCTTCAACAAATTAGAGCTCAGAGCGATAGAAAGGATGGTTTCATGTCTTATATC
AAACAGTTGTCCAAAGACAAAATAACATTCTTTACACAAGGTGGATCTAAAGGTGATAGT
AAAATCCAGACGGTGGAGTATTTATTGAAGCCAACAGAATACTTACCTACATTTCGTAAG
AACTCAAACAGTTGGGCATTGACAGCACAGTATGTGAATGGAAGACATTTTTTAACAGCT
TTTGAATTAAACGAAGGCATTATTATTCTTGAAAGCCCAGCGGAAGATACACCATCGAGA
ACTTTAAGACCTAATATAAAAAACGATGGCACATACATACAAGGGTTGTGGTCGCAGAAA
ATTATATATTTGTTGAAAAAAAATCACTTGGAGATACACAGTACTCAATTCTCACAGACC
CAGGGCGAAGTATTGTTAGGAGTGAAGAAAGATAGTACAATGCTTTGGTCGGCAGATATG
ATGGGGGAAGTTAAACGGGCATACCTAATGTCTGCTAAGGAACCAGGTTCATTACCTGGT
GGATGGAGAGTACCAACGTTCATGTCGGACTTGCAACTGCCAAGATTCATACTGGAACCC
TGTCTGATTATTACTACAAATGGTGCCTTTGTTTTAAACACAGTGAGTTCTCCATGCGAG
TGGCTAGTTGGGCTGATAGTTCGTGGCGGGTCGTGTGCTGAACAGTCGTGTGCTGCTCTG
GGTACAGTCGTGCCGCCGCTGCTGCGAGCTGCCGCTGACCTGCTGCTGGCTCGCGGAAAG
ATAGCTCCAGCACACTATCTCTACACGTTATCTCGTAGTCCGGCGGACGGCTGGGTGGCT
CGTCTGGGTGTGTTCGGTCGTCTGCACGAGTTGTCGATGTACAAACAAGCGGCCAACGTC
GGCAATCTGGGCAATGCGGCAATCACAGCAAAATTACTGGCGTTGCTCCTTAAGATTGGC
ACCAATTGTGAAGATAATTTTGATATGGATGTAAAATTCACAAACTTAAGCCCGGTGGAA
TTTCAAGAGCTGTCATGTGTCGCTGCGTGTATAGGACTGTGGGAGTTTGTTCCTATATTC
AGTGTTCACAGAGGCAACCCTATTTTACTATTGAACGCCATCAAATCTAAAAGCGTTATA
TGTCGGGGCGCCATCGTTGCCCTTTTGAATCAAAAGTGCCTCGTGCCGGTGTTACTTGAG
GAAAATGGACAGTGGTTTTTTGATTTTATTGCTGAGAAATGCAACAAGTTTGATACGATT
ATATTAAAGCGTTTGTGTCTATGGTTAAATCCTCTGCAGGATCAGCTGAGACCGGTCATG
AGAGATCTCAAACAAGGAATAACATCAATATATACGACTCGGATGCTTCAGTTGATAACG
ACGTTTATGCATATAGCGTGTGTGTTAGAGTCACGTGACCCTCGTTTGGACATACAAACG
AATTTGACCCTTCAACCTGGCACATGGGTTAGTTCGTTCACACCGAGACGGTCTCTGAGC
TGTGGGCTTGGACATTGGGGGTTGACTGATGACGGAAACGCCAAGATAATGGCCGCGAAC
ACACCAGTTAACACGGAGCTCATAGGGAAAGTAGTGGATATAGCCTGCGGAAGACATCAC
ACGTTACTGTTGACCGAGAATGGGATATACGCTGCCGGTGATAATAGCTACGGTCAGCTA
GGCGTTGGCTGCAGGTGGGGGGGAGCGGTCGGGGACGCGGCCATCGCTTCCGGGGAGCTC
CTACACGTGTCCTATCATTGGACGGCACCCCTCGTCGTAGTATCAGCTGGGCACTACCAT
TCAGCGGCGGTAGATGTCGGCGGAAGGCTCTACACGTGGGGATGGGGCGTCCATGGACAA
CTGTGTCTAGGCAGCGTAGACGATCAATACAGTCCACGGTTGGTTACGAAGTTGCAAGGA
AGAAAGGTGCTGAACGTGGGCTGCGGTTCGTGTCACACGGTAGTTCTGATGAAGAACGGA
GAGGTTTGGTCGTGTGGTGCCGGCGTGTTCGGACAACTGGCCGCCGGGTGCAGGGAAAAG
AGTTCTCTTCCACTGAGGGTTCTGATACAGGATGCTGTGGATGATATAGCTGTTGGCTAC
TTCCATAATAGGGCAAACGAGCAGACGACCTCCCTAATGGAGGTAGTTACTTTCACCCAT
GGAGATTCGCAACATAGTTTGGAGGATGTGTTGCCACCCTTGACTGCCGAAAAAGGAAAG
AAAAAGAAAGGGTGGGAAAAGGGAAAGGGCAACCGTCCCTCTCACTCATCGGACAAAACG
CAGCTATTAAAGACTATTTCACGCCGCTCTTCTCTGGCGTTGACTAACAAGAACCAGTTG
TGGTGTTGGGGTTCGAGTCCGCAACAGCTACGAGCGGCGAGCGCCAAACGGAACGAAGAA
GACAACGACGACGGAGACAGACATCTGGCGCTGAGACTCGTCGACACCAGTCACGTGAGA
GGGAGAATAGTTAGAATAGCAGCCGGTTGGCACCATTCCTGTATCATCGACAACACGGGT
ACGCTGTACACTTGGGGCCTCAACTTCGATGGACAATTAGGGACCGGAGATCGTAAGCAG
GTGAAAATACCTGTTGAGGTTAAGATTCCCAACGAAAGCCAAACGGAGCCGAGATCACCG
GATAAAATCGATCCTAAAGAAAATACTAAATGTCTGGTCGCTTGCGGCGGAGACTTCACC
ATATTCATAGACGACAATGGAAAGATTTATTCCACCGGGAACATGCACCTACAGGGTAAC
AATGAATTGGAGAAACTTAACAATAGGATCATAATGATGAAAACTACGAAGAGGGTTATC
AAAATACCGGCGGCGAGAAATAATAAGAAGTTCGTATTCCAGGCAATAGACTCTATAGAT
ATCATGTTCCCGTTCGACATTGATGACATCACAAGAAAAGACATTGAACCGCGAAAGAAT
CCTTTAGGAAAAATATCAGATTTCCAGAACAAATCCTGGGCTGACGACATGACACTGCTT
CTTAAACCGTGGATCAACGAGGATATACTATCTACAAATAAAAATATGGCCGCTAAGTTG
GCATATCACAGCGACAGACACTCAGACTGTTTGAGATATATGCTCGACAACCTAAAGAAT
GAAGTGCAAAGCGACAGATTATATCTGACACATCAAGATTCGGAAGAGAAAAATGGATCT
GTAAAGAAAGACGAAGTGAAAATTATTATCACCAACATTATATCGCAGCGCATCAAGGAC
GTATCCTTGGCGATCCTGAACGAAGAGCCCTATCCGGTGGTAGAGCCGAGTGTGTACCGC
ACGCTGCCCTGCTGTTGTGATGAGATGAAATACACGAGAAAGGACAAATCTGAAGTGACG
ACCCACGCTGCAGACCTGTCCAAACAGGCGGCAGACGTTATAGACAAATGTATCAGCATC
TTCCCAGTGGACAGTGCGCTTTGGGAACAATGTTTCCGTCTAGCCAAAGACTTTTATGTC
CAAAACGATCTGATCGTTGCCGACCTGGAGACGGTTTTACGTAAATACATGGAAACCAAC
GCGACCACTATGGCGGCGGCCATCATGTATTCTGACGACTGCGCTCAGTACAGCGAAATA
TTATCCCCAAAATTCTACTTGAATATGTGCAGTGACATACTAGACACATGGGGTTGA
Protein sequence:
MDFSGLFKLDVLLQQDIANHTFYEVGLKKYLAVSNNKELIFLYINAQSERFDSIYDWDFL
DNPVYCMCFEPSGTWVLIVSDEKVLLVPFLPLFIPQYTYDCKWSLSSVTVLPLLDIPQPT
SVVWWLTKESENIIIISSKSGIITFYSLESQSVVGETRVSGEVIDLQICFDDSLDLLALL
ISKGPTQQWKLVLEHRSLGYNWLQQIRAQSDRKDGFMSYIKQLSKDKITFFTQGGSKGDS
KIQTVEYLLKPTEYLPTFRKNSNSWALTAQYVNGRHFLTAFELNEGIIILESPAEDTPSR
TLRPNIKNDGTYIQGLWSQKIIYLLKKNHLEIHSTQFSQTQGEVLLGVKKDSTMLWSADM
MGEVKRAYLMSAKEPGSLPGGWRVPTFMSDLQLPRFILEPCLIITTNGAFVLNTVSSPCE
WLVGLIVRGGSCAEQSCAALGTVVPPLLRAAADLLLARGKIAPAHYLYTLSRSPADGWVA
RLGVFGRLHELSMYKQAANVGNLGNAAITAKLLALLLKIGTNCEDNFDMDVKFTNLSPVE
FQELSCVAACIGLWEFVPIFSVHRGNPILLLNAIKSKSVICRGAIVALLNQKCLVPVLLE
ENGQWFFDFIAEKCNKFDTIILKRLCLWLNPLQDQLRPVMRDLKQGITSIYTTRMLQLIT
TFMHIACVLESRDPRLDIQTNLTLQPGTWVSSFTPRRSLSCGLGHWGLTDDGNAKIMAAN
TPVNTELIGKVVDIACGRHHTLLLTENGIYAAGDNSYGQLGVGCRWGGAVGDAAIASGEL
LHVSYHWTAPLVVVSAGHYHSAAVDVGGRLYTWGWGVHGQLCLGSVDDQYSPRLVTKLQG
RKVLNVGCGSCHTVVLMKNGEVWSCGAGVFGQLAAGCREKSSLPLRVLIQDAVDDIAVGY
FHNRANEQTTSLMEVVTFTHGDSQHSLEDVLPPLTAEKGKKKKGWEKGKGNRPSHSSDKT
QLLKTISRRSSLALTNKNQLWCWGSSPQQLRAASAKRNEEDNDDGDRHLALRLVDTSHVR
GRIVRIAAGWHHSCIIDNTGTLYTWGLNFDGQLGTGDRKQVKIPVEVKIPNESQTEPRSP
DKIDPKENTKCLVACGGDFTIFIDDNGKIYSTGNMHLQGNNELEKLNNRIIMMKTTKRVI
KIPAARNNKKFVFQAIDSIDIMFPFDIDDITRKDIEPRKNPLGKISDFQNKSWADDMTLL
LKPWINEDILSTNKNMAAKLAYHSDRHSDCLRYMLDNLKNEVQSDRLYLTHQDSEEKNGS
VKKDEVKIIITNIISQRIKDVSLAILNEEPYPVVEPSVYRTLPCCCDEMKYTRKDKSEVT
THAADLSKQAADVIDKCISIFPVDSALWEQCFRLAKDFYVQNDLIVADLETVLRKYMETN
ATTMAAAIMYSDDCAQYSEILSPKFYLNMCSDILDTWG