Monarch geneset OGS2.0

DPOGS215867
TranscriptDPOGS215867-TA4074 bp
ProteinDPOGS215867-PA1357 aa
Genomic positionDPSCF300029 - 711678-720227
RNAseq coverage248x (Rank: top 42%)
Annotation
HeliconiusHMEL0078370.070.12% 
BombyxBGIBMGA000415-TA0.058.85% 
Drosophilaca-PA3e-3628.76% 
EBI UniRef50UniRef50_UPI00020619C72e-7030.45%UPI00020619C7 related cluster n=1 Tax=unknown RepID=UPI00020619C7
NCBI RefSeqXP_001948029.15e-7130.45%PREDICTED: similar to AGAP004229-PA [Acyrthosiphon pisum]
NCBI nr blastpgi|3287120249e-7030.45%PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
NCBI nr blastxgi|3287120242e-6730.41%PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Group
Gene OntologyGO:00055155.4e-07protein binding
KEGG pathwaynvi:1001184434e-27 
 K10615 (HERC4)maps-> Ubiquitin mediated proteolysis
InterPro domain[798-1081] IPR0090916.7e-57Regulator of chromosome condensation/beta-lactamase-inhibitor protein II
[815-863] IPR0004084.2e-10Regulator of chromosome condensation, RCC1
[37-181] IPR0110465.4e-07WD40 repeat-like-containing domain
Orthology groupMCL26828 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215867-TA
ATGTCTCAACAAAGTGAAAATATGGATTTCTCTGGTTTATTTAAATTAGATGTTCTTTTACAACAAGATATAGCAAACCACACTTTTTACGAAGTTGGATTAAAAAAATACCTGGCAGTCTCTAATAACAAAGAATTGATATTTTTGTACATAAATGCTCAGTCCGAAAGATTCGACAGCATATATGACTGGGATTTTCTTGATAATCCAGTTTATTGCATGTGTTTTGAACCCAGCGGAACTTGGGTTTTGATTGTCAGTGATGAAAAAGTATTGCTAGTGCCATTTCTTCCTTTGTTCATCCCACAGTACACATATGACTGTAAATGGTCCCTTTCAAGTGTCACAGTTCTGCCCCTTCTCGATATACCACAACCGACATCTGTTGTTTGGTGGCTTACAAAGGAATCCGAAAATATTATTATCATATCGTCTAAGAGTGGAATCATAACTTTTTATTCCTTGGAGTCACAAAGTGTTGTTGGCGAAACAAGAGTGTCGGGGGAGGTTATAGATTTACAAATTTGTTTTGACGATTCCCTTGACTTGCTGGCTCTACTCATTTCCAAAGGACCAACACAGCAATGGAAATTGGTATTAGAACATAGATCCCTTGGGTATAACTGGCTTCAACAAATTAGAGCTCAGAGCGATAGAAAGGATGGTTTCATGTCTTATATCAAACAGTTGTCCAAAGACAAAATAACATTCTTTACACAAGGTGGATCTAAAGGTGATAGTAAAATCCAGACGGTGGAGTATTTATTGAAGCCAACAGAATACTTACCTACATTTCGTAAGAACTCAAACAGTTGGGCATTGACAGCACAGTATGTGAATGGAAGACATTTTTTAACAGCTTTTGAATTAAACGAAGGCATTATTATTCTTGAAAGCCCAGCGGAAGATACACCATCGAGAACTTTAAGACCTAATATAAAAAACGATGGCACATACATACAAGGGTTGTGGTCGCAGAAAATTATATATTTGTTGAAAAAAAATCACTTGGAGATACACAGTACTCAATTCTCACAGACCCAGGGCGAAGTATTGTTAGGAGTGAAGAAAGATAGTACAATGCTTTGGTCGGCAGATATGATGGGGGAAGTTAAACGGGCATACCTAATGTCTGCTAAGGAACCAGGTTCATTACCTGGTGGATGGAGAGTACCAACGTTCATGTCGGACTTGCAACTGCCAAGATTCATACTGGAACCCTGTCTGATTATTACTACAAATGGTGCCTTTGTTTTAAACACAGTGAGTTCTCCATGCGAGTGGCTAGTTGGGCTGATAGTTCGTGGCGGGTCGTGTGCTGAACAGTCGTGTGCTGCTCTGGGTACAGTCGTGCCGCCGCTGCTGCGAGCTGCCGCTGACCTGCTGCTGGCTCGCGGAAAGATAGCTCCAGCACACTATCTCTACACGTTATCTCGTAGTCCGGCGGACGGCTGGGTGGCTCGTCTGGGTGTGTTCGGTCGTCTGCACGAGTTGTCGATGTACAAACAAGCGGCCAACGTCGGCAATCTGGGCAATGCGGCAATCACAGCAAAATTACTGGCGTTGCTCCTTAAGATTGGCACCAATTGTGAAGATAATTTTGATATGGATGTAAAATTCACAAACTTAAGCCCGGTGGAATTTCAAGAGCTGTCATGTGTCGCTGCGTGTATAGGACTGTGGGAGTTTGTTCCTATATTCAGTGTTCACAGAGGCAACCCTATTTTACTATTGAACGCCATCAAATCTAAAAGCGTTATATGTCGGGGCGCCATCGTTGCCCTTTTGAATCAAAAGTGCCTCGTGCCGGTGTTACTTGAGGAAAATGGACAGTGGTTTTTTGATTTTATTGCTGAGAAATGCAACAAGTTTGATACGATTATATTAAAGCGTTTGTGTCTATGGTTAAATCCTCTGCAGGATCAGCTGAGACCGGTCATGAGAGATCTCAAACAAGGAATAACATCAATATATACGACTCGGATGCTTCAGTTGATAACGACGTTTATGCATATAGCGTGTGTGTTAGAGTCACGTGACCCTCGTTTGGACATACAAACGAATTTGACCCTTCAACCTGGCACATGGGTTAGTTCGTTCACACCGAGACGGTCTCTGAGCTGTGGGCTTGGACATTGGGGGTTGACTGATGACGGAAACGCCAAGATAATGGCCGCGAACACACCAGTTAACACGGAGCTCATAGGGAAAGTAGTGGATATAGCCTGCGGAAGACATCACACGTTACTGTTGACCGAGAATGGGATATACGCTGCCGGTGATAATAGCTACGGTCAGCTAGGCGTTGGCTGCAGGTGGGGGGGAGCGGTCGGGGACGCGGCCATCGCTTCCGGGGAGCTCCTACACGTGTCCTATCATTGGACGGCACCCCTCGTCGTAGTATCAGCTGGGCACTACCATTCAGCGGCGGTAGATGTCGGCGGAAGGCTCTACACGTGGGGATGGGGCGTCCATGGACAACTGTGTCTAGGCAGCGTAGACGATCAATACAGTCCACGGTTGGTTACGAAGTTGCAAGGAAGAAAGGTGCTGAACGTGGGCTGCGGTTCGTGTCACACGGTAGTTCTGATGAAGAACGGAGAGGTTTGGTCGTGTGGTGCCGGCGTGTTCGGACAACTGGCCGCCGGGTGCAGGGAAAAGAGTTCTCTTCCACTGAGGGTTCTGATACAGGATGCTGTGGATGATATAGCTGTTGGCTACTTCCATAATCTGGCGTTGACTAACAAGAACCAGTTGTGGTGTTGGGGTTCGAGTCCGCAACAGCTACGAGCGGCGAGCGCCAAACGGAACGAAGAAGACAACGACGACGGAGACAGACATCTGGCGCTGAGACTCGTCGACACCAGTCACGTGAGAGGGAGAATAGTTAGAATAGCAGCCGGTTGGCACCATTCCTGTATCATCGACAACACGGGTACGCTGTACACTTGGGGCCTCAACTTCGATGGACAATTAGGGACCGGAGATCGTAAGCAGGTGAAAATACCTGTTGAGGTTAAGATTCCCAACGAAAGCCAAACGGAGCCGAGATCACCGGATAAAATCGATCCTAAAGAAAATACTAAATGTCTGGTCGCTTGCGGCGGAGACTTCACCATATTCATAGACGACAATGGAAAGATTTATTCCACCGGGAACATGCACCTACAGGGTAACAATGAATTGGAGAAACTTAACAATAGGATCATAATGATGAAAACTACGAAGAGGGTTATCAAAATACCGGCGGCGAGAAATAATAAGAAGTTCGTATTCCAGGCAATAGACTCTATAGATATCATGTTCCCGTTCGACATTGATGACATCACAAGAAAAGACATTGAACCGCGAAAGAATCCTTTAGGAAAAATATCAGATTTCCAGAACAAATCCTGGGCTGACGACATGACACTGCTTCTTAAACCGTGGATCAACGAGGATATACTATCTACAAATAAAAATATGGCCGCTAAGTTGGCATATCACAGCGACAGACACTCAGACTGTTTGAGATATATGCTCGACAACCTAAAGAATGAAGTGCAAAGCGACAGATTATATCTGACACATCAAGATTCGGAAGAGAAAAATGGATCTGTAAAGAAAGACGAAGTGAAAATTATTATCACCAACATTATATCGCAGCGCATCAAGGACGTATCCTTGGCGATCCTGAACGAAGAGCCCTATCCGGTGGTAGAGCCGAGTGTGTACCGCACGCTGCCCTGCTGTTGTGATGAGATGAAATACACGAGAAAGGACAAATCTGAAGTGACGACCCACGCTGCAGACCTGTCCAAACAGGCGGCAGACGTTATAGACAAATGTATCAGCATCTTCCCAGTGGACAGTGCGCTTTGGGAACAATGTTTCCGTCTAGCCAAAGACTTTTATGTCCAAAACGATCTGATCGTTGCCGACCTGGAGACGGTTTTACGTAAATACATGGAAACCAACGCGACCACTATGGCGGCGGCCATCATGTATTCTGACGACTGCGCTCAGTACAGCGAAATATTATCCCCAAAATTCTACTTGAATATGTGCAGTGACATACTAGACACATGGGGTTGA

Protein sequence:

>DPOGS215867-PA
MSQQSENMDFSGLFKLDVLLQQDIANHTFYEVGLKKYLAVSNNKELIFLYINAQSERFDSIYDWDFLDNPVYCMCFEPSGTWVLIVSDEKVLLVPFLPLFIPQYTYDCKWSLSSVTVLPLLDIPQPTSVVWWLTKESENIIIISSKSGIITFYSLESQSVVGETRVSGEVIDLQICFDDSLDLLALLISKGPTQQWKLVLEHRSLGYNWLQQIRAQSDRKDGFMSYIKQLSKDKITFFTQGGSKGDSKIQTVEYLLKPTEYLPTFRKNSNSWALTAQYVNGRHFLTAFELNEGIIILESPAEDTPSRTLRPNIKNDGTYIQGLWSQKIIYLLKKNHLEIHSTQFSQTQGEVLLGVKKDSTMLWSADMMGEVKRAYLMSAKEPGSLPGGWRVPTFMSDLQLPRFILEPCLIITTNGAFVLNTVSSPCEWLVGLIVRGGSCAEQSCAALGTVVPPLLRAAADLLLARGKIAPAHYLYTLSRSPADGWVARLGVFGRLHELSMYKQAANVGNLGNAAITAKLLALLLKIGTNCEDNFDMDVKFTNLSPVEFQELSCVAACIGLWEFVPIFSVHRGNPILLLNAIKSKSVICRGAIVALLNQKCLVPVLLEENGQWFFDFIAEKCNKFDTIILKRLCLWLNPLQDQLRPVMRDLKQGITSIYTTRMLQLITTFMHIACVLESRDPRLDIQTNLTLQPGTWVSSFTPRRSLSCGLGHWGLTDDGNAKIMAANTPVNTELIGKVVDIACGRHHTLLLTENGIYAAGDNSYGQLGVGCRWGGAVGDAAIASGELLHVSYHWTAPLVVVSAGHYHSAAVDVGGRLYTWGWGVHGQLCLGSVDDQYSPRLVTKLQGRKVLNVGCGSCHTVVLMKNGEVWSCGAGVFGQLAAGCREKSSLPLRVLIQDAVDDIAVGYFHNLALTNKNQLWCWGSSPQQLRAASAKRNEEDNDDGDRHLALRLVDTSHVRGRIVRIAAGWHHSCIIDNTGTLYTWGLNFDGQLGTGDRKQVKIPVEVKIPNESQTEPRSPDKIDPKENTKCLVACGGDFTIFIDDNGKIYSTGNMHLQGNNELEKLNNRIIMMKTTKRVIKIPAARNNKKFVFQAIDSIDIMFPFDIDDITRKDIEPRKNPLGKISDFQNKSWADDMTLLLKPWINEDILSTNKNMAAKLAYHSDRHSDCLRYMLDNLKNEVQSDRLYLTHQDSEEKNGSVKKDEVKIIITNIISQRIKDVSLAILNEEPYPVVEPSVYRTLPCCCDEMKYTRKDKSEVTTHAADLSKQAADVIDKCISIFPVDSALWEQCFRLAKDFYVQNDLIVADLETVLRKYMETNATTMAAAIMYSDDCAQYSEILSPKFYLNMCSDILDTWG-