New model in OGS2.0 | DPOGS208310  |
---|---|
Genomic Position | scaffold906:- 136192-136762 |
See gene structure | |
CDS Length | 438 |
Paired RNAseq reads   | 529 |
Single RNAseq reads   | 1332 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002219 (2e-67) |
Best Drosophila hit   | Bet5 (4e-50) |
Best Human hit | trafficking protein particle complex subunit 1 (2e-46) |
Best NR hit (blastp)   | trafficking protein particle complex 1 [Bombyx mori] (1e-67) |
Best NR hit (blastx)   | trafficking protein particle complex 1 [Bombyx mori] (4e-66) |
GeneOntology terms    | GO:0016192 vesicle-mediated transport GO:0030008 TRAPP complex GO:0006888 ER to Golgi vesicle-mediated transport GO:0005801 cis-Golgi network |
InterPro families    | IPR007233 Sybindin-like protein IPR011012 Longin-like |
Orthology group | MCL14590 |
Nucleotide sequence:
ATGACAATTTATAATTTATATATATTTGATCGCTATGGTACTTTACTGTACTATGGGGAA
TGGAACAGAACTAAACAAGCGGGAATGTCGCGAGAGGAGGAAGGAAAACTAATGTACGGA
ATGCTCTTTTCAATCAAATCATTTGTTGCCAAAATATCGCCACTAGATCCCAAAGATGGT
TTCCTGAACTACAAAACATCTAAATATACATTGCATTATTTAGAAACTCCTTCAGGATTA
AAGTTTGTTATGAACACAGATAACCAAGTGCAGGGAGTCAGAGAATTGTTAAAGAAAATA
TATGCAGAGATCTACGTTAAATATATAACTAGGAACCCTTTGTGCGGAATCGGTGAACCC
ATAACAAGTGAACTCTTCAAAACTAAACTGGATGCATTCATCAAACAAGCACCGTTCGCC
GCAGCACGGGCATCTTGA
Protein sequence:
MTIYNLYIFDRYGTLLYYGEWNRTKQAGMSREEEGKLMYGMLFSIKSFVAKISPLDPKDG
FLNYKTSKYTLHYLETPSGLKFVMNTDNQVQGVRELLKKIYAEIYVKYITRNPLCGIGEP
ITSELFKTKLDAFIKQAPFAAARAS