| New model in OGS2.0 | DPOGS211139 |
|---|---|
| Genomic Position | scaffold230:+ 2281-13481 |
| See gene structure | |
| CDS Length | 963 |
| Paired RNAseq reads | 239 |
| Single RNAseq reads | 613 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003012 (6e-09) |
| Best Drosophila hit | CG34400, isoform C (4e-71) |
| Best Human hit | whirlin isoform 3 (1e-34) |
| Best NR hit (blastp) | CG34400, isoform C [Drosophila melanogaster] (3e-73) |
| Best NR hit (blastx) | GA23508 [Drosophila pseudoobscura pseudoobscura] (9e-76) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0005515 protein binding |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | MCL14380 |
Nucleotide sequence:
ATGGATCGATACGGCAGGCCAGCCTCGCCACCACCACAACGACCCCTGAGATCTGCAAGC
AAGGATCGCTCTATACGGAGGGTGGATTTGTGTATCGAGCCGGGGCAGTCACTCGGACTG
ATGATTCGCGGAGGTTTGGAGTACAACCTTGGAATATACATCACAGGGGTTGACAAGGAT
TCTGTAGCTGACCGGGCGGGACTTATGGTCGGCGACCAGATCTTGGAAGTGAATGGACAG
TCATTCGTAGATGTGACTCACGACGAAGCTGTCGCCCAGCTGAAGTACCATAAACGAATG
TCTTTGCTAGTGAGAGATGTTGGAAAAGTTCCTCACGCTTGTACTGCTTATGGAGAACGA
GATGCTGCCCCTAGAATAAGCGGCTGGGGTAAAAGAAGAGGTGCGGCTGCAACAGCTGTC
GAACAGAAGGCAAAGTCGTTGTTACCTCAAAGCGACTTGCCCGCGCTGGCATATTACATG
GAGGAATACGCCAACAGAAGACTCACAGCTGACGCATTCCTCACAGTTTTAAGAGATTTA
CTCGACACACCCCAAAAATATTCCCTTCTGACGGAAATCCGGGAGTTTTTACTTCCTGAG
GACCGGCCTCGTTTCGACGAGCTCGTGTATAGACGCCCCGAGGACGGTACAGAACACCAT
GTGAAGCGAAGTGGCGAACGACACATGCTGCCGTCGTCAACCATGCACGACCTCCACGAC
CCGGAGGCGCCGGCTGAAGTGCCCCTCGTTGTGGATCACCGCTCGCCCTCCGAGGACTCC
GGCTTGGGCCTCCCGCCTCATGACCAGGCTTACAGGAGCGGGCGCGCGTGGTGCCCTGGG
GACCCTGCGCCCCCACCGCCCAAGCCGCCGGACGAAGACCTGGAGCCTCCGCCCGAGCGC
TGTAGAAATTGGGCGGGCGTGTGGCGTCGAAGTCGTCTCGTGCCGGACGTCAGTTCAGTG
TAG
Protein sequence:
MDRYGRPASPPPQRPLRSASKDRSIRRVDLCIEPGQSLGLMIRGGLEYNLGIYITGVDKD
SVADRAGLMVGDQILEVNGQSFVDVTHDEAVAQLKYHKRMSLLVRDVGKVPHACTAYGER
DAAPRISGWGKRRGAAATAVEQKAKSLLPQSDLPALAYYMEEYANRRLTADAFLTVLRDL
LDTPQKYSLLTEIREFLLPEDRPRFDELVYRRPEDGTEHHVKRSGERHMLPSSTMHDLHD
PEAPAEVPLVVDHRSPSEDSGLGLPPHDQAYRSGRAWCPGDPAPPPPKPPDEDLEPPPER
CRNWAGVWRRSRLVPDVSSV