New model in OGS2.0 | DPOGS214402  |
---|---|
Genomic Position | scaffold4333:- 9198-18314 |
See gene structure | |
CDS Length | 2262 |
Paired RNAseq reads   | 1664 |
Single RNAseq reads   | 4335 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011360 (0.0) |
Best Drosophila hit   | CG6904, isoform A (0.0) |
Best Human hit | glycogen [starch] synthase, muscle isoform 1 (0.0) |
Best NR hit (blastp)   | glycogen synthase [Locusta migratoria] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG6904-PA, isoform A [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0005978 glycogen biosynthetic process GO:0004373 glycogen (starch) synthase activity |
InterPro families   | IPR008631 Glycogen synthase |
Orthology group | MCL11638 |
Nucleotide sequence:
ATGTCGCGGGACAGATCATCACGTCGATTTTACCGCGCTGAGTCGACCCATGACCTTTTG
TCGTACATGGACAAGGGTCAGGCTGCTTGCGAGGAGAATAGATGGACATTCGAGACAGCC
TGGGAGGCTGCCAATAAAGTTGGTGGCATCTACACTGTCATAAGATCAAAGGCGTATGTA
TCAACTGAGGAAATGGGAGATAACTACTGTTTATTAGGTCCTTATAAGGAGACCAGTGCC
AGAACCGAAGTGGAGGAATCAGACTTTCCCCCCAACTCTCCTCTTACTGTAGCAGTGAAT
GCCATGAGAAGTCAAGGATATAAGCTTCACACAGGAACTTGGCTGGTGGACGGAAACCCT
CAGATCATCCTCTTCGACATCGGTTCAGCTGCGTGGCAGATGGATTCCTTCAAGCAGGAG
CTATGGGATACGACATCTGTCGGGATACCGCACCTAGACGTGGAGGCCAACGACGCCGTT
ATTTTGGGCTTCATGGTGGCTCAATTTATCACAGAGTTCAGAAAAGCAGCCGAGAACTAC
AGCGACACTCCGCCGCGAGTGGTCGCACATTTCCACGAGTGGCAGGCTGGTATAGGACTT
ATAGTTTTGAGAATCCGTCACGTCGATGTGGCGACAGTGTTCACAACACACGCGACCCTC
CTCGGCCGATACCTGTGTGCTGGCAGCACGGATTTCTATAATAATTTAGATAAGTTCTCT
GTGGACGAGGAGGCTGGAAAGAGACAGATATATCACAGGTACTGTATGGAGCGAGCGGCC
GCTCACATGACGCACGTGTTTACAACCGTCTCGGATATAACAGGCTACGAGGCGGAACAC
CTCCTCAAGAGGAAACCTGACTTCATTACGCCGAACGGCCTCAACGTGAAGAAGTTCTCG
GCGCTTCACGAGTTTCAAAATCTCCACGCGCTTGCCAAGAACAAAATTAACGAGTTCGCT
AGGGGGCATTTCTACGGTCATTTCAACTTCGACTTGGACAAGACCCTATATTTCTTCATC
GCTGGACGATATGAATTCGGTAATAAGGGAGCTGATATATTCATAGAGGCTTTGGCCAGG
TTGAATCACTACTTAAAGTCTTCAGGATCAGATATGACGGTGATAGCGTTCCTCATCTTC
CCGGCCAAGACCAACAACTTCAACGTGGAGAGTCTCCGAGGACACGCCGTCACCAAGGCG
CTCCGGGACACCATCAGCGACATACAGCAGGAAATCGGCCGGAGGATGTACGACATTTGT
CTACGCGGCCACCTCCCGGAACCGTCGGACCTACTTCACAAGGACGACACGGTTCGTCTC
AAGAGATGTATCTACGCCCTCCAGCGAGACGGTCTCCCGCCTGTTACCACGCATAATGTT
GTGGATGATTGGAATGACCCCGTATTAAATTCTGTCCGCCGCTGTCAACTGTTCAACACT
GTCAATGATAAAGTTAAGGTGATCTTCCACCCGGAGTTCCTGACGTCCACTAACCCGTTG
TTCGGTTTAGACTACGAGGAGTTCGTCCGTGGGTGTCATTTGGGGGTGTTCCCTTCGTAC
TACGAGCCCTGGGGGTATACACCAGCTGAGTGTACTGTCATGGGGATACCGAGCATCACC
ACTAATTTATCTGGGTTCGGCTGTTTCATGCAGGAACACATCGCCGACCCCATGTCCTAC
GGCATCTACGTGGTGGACAGGCGGTACATATCTCTCGAGGGTTCCGTACAACAACTTGCT
CAATACATGTTCGACTTTACCAAACTGACGAGAAGACAGCGCATTATACAGAGGAATAGA
ACGGAAAGATTGTCAGATCTCATGGATTGGAGAAATTTAGGCATTTATTACCGCCAAGCC
AGGGCCCAGGCGCTGAAGACCGTGTACCCTGATTACATCGATCACATGGACAGGGAATTG
GGCAAAAGGTTCAACTACCCTCGACCGATATCAGAACCACCCAGTCCGACACATTCTATG
CGTCGCAACCACGAGACTTCTTGGTTGACTGCGTCATATCACAAGGAAATAGAACAATAT
AAGGACTATAAAGATCAGGCTGTTCAAACTGATGATTTGAGGAGGAAGTCCTTGGAGATA
TTAGGGCTATCCGACCCCGGGGGTCAAGACCTGGAGGTCACATTCGAGAGGAACCTGGAC
CTGTCAGAGTCTGACAGTTTCCAGACGCCCACAGAGCTGCTAGATGTGACCGAAGCCGAC
CAGATAGAAATCATGATCAGCGATATGAACGCGGATACCTAG
Protein sequence:
MSRDRSSRRFYRAESTHDLLSYMDKGQAACEENRWTFETAWEAANKVGGIYTVIRSKAYV
STEEMGDNYCLLGPYKETSARTEVEESDFPPNSPLTVAVNAMRSQGYKLHTGTWLVDGNP
QIILFDIGSAAWQMDSFKQELWDTTSVGIPHLDVEANDAVILGFMVAQFITEFRKAAENY
SDTPPRVVAHFHEWQAGIGLIVLRIRHVDVATVFTTHATLLGRYLCAGSTDFYNNLDKFS
VDEEAGKRQIYHRYCMERAAAHMTHVFTTVSDITGYEAEHLLKRKPDFITPNGLNVKKFS
ALHEFQNLHALAKNKINEFARGHFYGHFNFDLDKTLYFFIAGRYEFGNKGADIFIEALAR
LNHYLKSSGSDMTVIAFLIFPAKTNNFNVESLRGHAVTKALRDTISDIQQEIGRRMYDIC
LRGHLPEPSDLLHKDDTVRLKRCIYALQRDGLPPVTTHNVVDDWNDPVLNSVRRCQLFNT
VNDKVKVIFHPEFLTSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSIT
TNLSGFGCFMQEHIADPMSYGIYVVDRRYISLEGSVQQLAQYMFDFTKLTRRQRIIQRNR
TERLSDLMDWRNLGIYYRQARAQALKTVYPDYIDHMDRELGKRFNYPRPISEPPSPTHSM
RRNHETSWLTASYHKEIEQYKDYKDQAVQTDDLRRKSLEILGLSDPGGQDLEVTFERNLD
LSESDSFQTPTELLDVTEADQIEIMISDMNADT