| New model in OGS2.0 | DPOGS209384 |
|---|---|
| Genomic Position | scaffold151:- 51191-54283 |
| See gene structure | |
| CDS Length | 2454 |
| Paired RNAseq reads | 1691 |
| Single RNAseq reads | 4122 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005526 (0.0) |
| Best Drosophila hit | light, isoform A (0.0) |
| Best Human hit | vacuolar protein sorting-associated protein 41 homolog isoform 1 (4e-159) |
| Best NR hit (blastp) | PREDICTED: similar to light protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to light protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006727 ommochrome biosynthetic process GO:0007033 vacuole organization GO:0006726 eye pigment biosynthetic process GO:0007041 lysosomal transport GO:0046907 intracellular transport GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport GO:0008270 zinc ion binding GO:0005515 protein binding GO:0033227 dsRNA transport GO:0008340 determination of adult lifespan |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR001841 Zinc finger, RING-type IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR011990 Tetratricopeptide-like helical IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001680 WD40 repeat IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL13488 |
Nucleotide sequence:
ATGGGCAATGACGTCGAAAATATCTTATTAAAAGATGCTGTGAGCTGCATCTGTGTGCAT
ACCAAGTTTATTTGCTTAGGAACTCAGTGGGGAGTGATACATTTACTGGATCATGATGGA
AATACAGTGCCCATCTCACCAGACAATAATCAGAAAGATCTGCAAGCTCATGCTATAGCT
ATAAACAAAATATCTGTAGACCTAAATGGCGACTACATCGCTAGCTGCTCTGACGATGGC
AAAGTGGTAGTGTACGGCCTCTACTCACCAGACAATACTCACAATCTCACATTAGGGAGA
GTTGTTAAATCAGTCTCCTTAGATCCTTATTATTTTAAATCTGGGTCAGGACGAAGGTTC
CTCACAGGTGATAATAAACTCACCCTGTACGAGAAGACTTTCTTGAATCGGTTGCGAAGT
ACCGTTTTGTGTGAGTGTGAAGGTTATGTCCAGGCAATAGCGTGGCATGAGCGATTTGTG
GCATGGGCCAGTGAGTCTGGTGTGAGAGTGTATGACCTCTCTGCTAGATGCTCTCTGGGT
CTCATACAGTGGGAACGGAACCCTAATAGGTCCATCGAAGACTTTCGCTGTAACCTTCTC
TGGTCAGCCCCCAAGACACTCATGATTGGCTGGGTGGACACTATCAGAATATGTGTCATA
AGGAAAAGGAGTCACATAGAGTTACAAACGCGTGATGTCACAGAATATTTAGTTGATCCA
GTGCATACATTTCAAGTGGATTATTTCATAAGCGGCCTGGGACCTCTTGATGATCAGCTG
GTGTTGTTGGGGGTACCTAAGGAATGTGATCCCGAAACTGGAAAGGCCCAGAGACCGGTA
CTGGCTGTAGCCGACTATAAGGATTGTGAATTCTGTGAAGTATCCAACGACAGTTTAAAC
ATTATTGGCTTTCAAGAATATTCTTGTAACGACTACTATTTAGACATGCTCATTGAAGAA
AATAGATTCTTCATAGTGTCGCCGAAGGAAATAGTTATAGCGAGTCCCTACGACATCGAC
GACAGAGTCAACTGGCTAACGGCGCACGAGAGATTCGAGAAGGCGATATCAGTTCTGGAA
GAGAACGGCGGTAAAACATCCAAGCATTCCATAGTGACTGTGGGAGTGCAGTATCTAGAC
CACCTGCTGGCCGAACGCCTGTTCGATGAAGCGGCGGTCTTGTGTGCCAGAATATGTAAA
AATGACAAAGTGTTGTGGGAAAATCAAATATTTAAGTTCTCTAAGATGAATCAATTGCGA
GCCATCAGCCCCTACGTGCCCAGAAACCCTGGTCAAGCGCTGAGTCCGCATATTTACGAA
CTCATATTTTTGGAATACCTAAAGGAGGACCCTCAAGGTTTCCTCAGGCTAGTTCAGGAA
TGGAACCCCGCTCTGTATAAAACCGGAGTCATCATAAAAGCAGTATTAGATTATCTTTTA
ACGACGGAGGTCGAGAAGAACATTTATTTAGAAGCTCTGGCTCTCCTCTACTGCTACCAG
AAGAAATACGACAAAGCACTCACCGCGTACTTACGACTGCAGCACAAAGACGTCTTTAAA
CTGATCACTAAACACAACATGTACTCCGTCATATACGACAAGATACTGGAACTGATGTCT
CTCGACTGTGATAAGGCGATCGCCATCCTCTTACAAGACAAGACCAAGGTCCCCGTCCAA
GTAGTGGAGAAGCAGCTGGCCGACCACGACGAGTACTTATTCAAATACTTGGACGCGTAC
AGTAAAGTCGAACCCAACGGACGATACCACGGGAAGCTAGTCAGGCTGTACGCCAAATAC
GCCAGGGAAAAATTACTACCGTTTCTGAAATGTAGCGACAACTATCCCATACAGGAGGCC
TTGGACGTCTGTCAGAGCAACGAGTTCTATCCGGAGATGGTCTTCCTGCTGGGTCGGATA
GGAAACACGAGGGAGGCTCTGCAAATTATAATTGAAAAGTTAGACGACATCAACCAGGCC
ATAGGCTTCTGTCAGGAACACAACGACAAGGAGCTCTGGACGGATCTCATCAAGCAGACG
GTCGACAAGCCGGAGTGCGTGTCGCTGTTGCTGAAGAGGATCGGCAACTACGTGGACCCC
AGGATGCTCATAGAGAACATACAGCCCGGCTGCGAGATAAAAGACTTGAAGGACTCCCTG
GCCAAGATGATGTGCGACTACCACTTGCAGATGTCGGTGCAGGAGGCGTGCAAGGTCATC
ACACTGAGGAACTACTTCGACCTCCACGAGAAACTGATCATCAACCAGCAGAGAGGCATC
TCGGTGACGGACGAGTTCCTGTGCAGCGTGTGTCAGGGCAGGATCATCATCCGGGACCTG
GCCAACGCCTCCAACCTCATCGTGTACAACTGCCGACATTCCTTCCACATAGAGTGCCTC
CCGGACGGCGTCAACAACGCGTCCTGCAGCGTGTGCAGCGCCGTCAAGATGTGA
Protein sequence:
MGNDVENILLKDAVSCICVHTKFICLGTQWGVIHLLDHDGNTVPISPDNNQKDLQAHAIA
INKISVDLNGDYIASCSDDGKVVVYGLYSPDNTHNLTLGRVVKSVSLDPYYFKSGSGRRF
LTGDNKLTLYEKTFLNRLRSTVLCECEGYVQAIAWHERFVAWASESGVRVYDLSARCSLG
LIQWERNPNRSIEDFRCNLLWSAPKTLMIGWVDTIRICVIRKRSHIELQTRDVTEYLVDP
VHTFQVDYFISGLGPLDDQLVLLGVPKECDPETGKAQRPVLAVADYKDCEFCEVSNDSLN
IIGFQEYSCNDYYLDMLIEENRFFIVSPKEIVIASPYDIDDRVNWLTAHERFEKAISVLE
ENGGKTSKHSIVTVGVQYLDHLLAERLFDEAAVLCARICKNDKVLWENQIFKFSKMNQLR
AISPYVPRNPGQALSPHIYELIFLEYLKEDPQGFLRLVQEWNPALYKTGVIIKAVLDYLL
TTEVEKNIYLEALALLYCYQKKYDKALTAYLRLQHKDVFKLITKHNMYSVIYDKILELMS
LDCDKAIAILLQDKTKVPVQVVEKQLADHDEYLFKYLDAYSKVEPNGRYHGKLVRLYAKY
AREKLLPFLKCSDNYPIQEALDVCQSNEFYPEMVFLLGRIGNTREALQIIIEKLDDINQA
IGFCQEHNDKELWTDLIKQTVDKPECVSLLLKRIGNYVDPRMLIENIQPGCEIKDLKDSL
AKMMCDYHLQMSVQEACKVITLRNYFDLHEKLIINQQRGISVTDEFLCSVCQGRIIIRDL
ANASNLIVYNCRHSFHIECLPDGVNNASCSVCSAVKM