| New model in OGS2.0 | DPOGS215960 |
|---|---|
| Genomic Position | scaffold439:+ 177997-179783 |
| See gene structure | |
| CDS Length | 1446 |
| Paired RNAseq reads | 1585 |
| Single RNAseq reads | 5169 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001075 (0.0) |
| Best Drosophila hit | SMSr, isoform A (6e-42) |
| Best Human hit | phosphatidylcholine:ceramide cholinephosphotransferase 1 (7e-65) |
| Best NR hit (blastp) | PREDICTED: similar to spingomyelin synthetase [Tribolium castaneum] (3e-103) |
| Best NR hit (blastx) | PREDICTED: similar to spingomyelin synthetase [Tribolium castaneum] (8e-104) |
| GeneOntology terms | GO:0030173 integral to Golgi membrane GO:0005634 nucleus GO:0005886 plasma membrane GO:0005515 protein binding GO:0016740 transferase activity GO:0000139 Golgi membrane GO:0005794 Golgi apparatus GO:0006665 sphingolipid metabolic process GO:0016049 cell growth GO:0006954 inflammatory response GO:0033188 sphingomyelin synthase activity GO:0043066 negative regulation of apoptosis GO:0006686 sphingomyelin biosynthetic process GO:0016301 kinase activity GO:0006629 lipid metabolic process GO:0047493 ceramide cholinephosphotransferase activity GO:0000138 Golgi trans cisterna GO:0005783 endoplasmic reticulum GO:0016021 integral to membrane |
| InterPro families | ND |
| Orthology group | MCL16667 |
Nucleotide sequence:
ATGACACAAAAGAGAGCGCCCTCCGTCCGCCCCTCGTGCTTTGTGACCGTGGATATGGAG
TTATTTACTGTACCGTCTCGCAAATACGTCTCTATTTGCGCAATTCAATCCAATGGTGAT
TGGATGACGATCTCAGCACGCTCCCCGGATAAGGAGCCGTCGCCACCCAAGCAGATCAAC
TTCGCTGAGCCGCTGGTCGAGTCCGTGCGTGTATACCTTGTAAATGAGCTGCCTACAAAG
CAGCTAGCGCTGGTGCAGCGCGCACCGTCGCCCACCACACCATCCCCACCACCATCTCCA
CGCTGCCATGTGGACATAGCGACCTCCACAGACCGTGAGGATATCAAAGGCATCAACTTC
GAGGCACGACTCAAGCGTAATGACCTAAATAACAACGCATCTCGTCGCAGAAACGATAGG
AGAGAGATGCCCAGTCAAGCTGAACTAATGCAGCGGCAGCCGTTGCTGGCGAGGGCCGTC
AAAGCTGACGCGCCACAAGCCACTACAGATGAATCGGATCCAGATCAAGATCATTCACCT
CAACGCACTCACGCCGGAGACTTTATGGTAGAAATACCCGCGGGAACGGTGAGAGAAGAA
AGATACCCGAAAGAAATATGGAAAACAATACTATCATTCTTCTTCTTATTTCTGTGTGTC
TGCATAAATATGATGTCTCTATCACTGGTACACGAGCGTCTTCCGGACCGAAATACGACG
CCGCCTTTGAATGATATCATACTAGACAACGTGACAGCACAAGACTGGGGTTTAGCTGTG
TCAGAGTATCTGATTATGATCTCAACAACGGTAGCCATGATCGTGGTTGTATTTCACAAG
CACCGATTCATCGTGGCTCGTCGCCTCTTCTTCATTATTGGCCTATTATACTTGTACAGG
TCCGTCACCATGTTTGTGACCGTGCTGCCTGTGTCAAGTAAGACATACTTCTGTAGTCCG
AAGAGTAATTCTACAACACCCCTCCTCGTTATAAAGAGAATGTTTTATTTAATATCAGGG
TTCGGACTGTCGATCAATGGAAAGCACACATACTGCGGAGATTACATATACTCCGGGCAC
ACAATGGTTTTAGTGCTAAGTTACCTGATCGTGGCAGAATATTCTCCAAAAAAATTATGG
CCGGTGCATTGGGCTATGTGGGGTTCGGCTGTTCTCGGCGTATCATTTGTGTTATTAGCA
CACGGACATTACACAGTGGATGTTGTGATAGCATACTATATAACAACTAGATTATTCTGG
ACGTTCCATTCACTGCTCGTCACGCCACATCGAAGCGGCAACGGCTACAACCATTACATG
ATACAGCGAGAATGGTGGTACTGGCTGTTCACCTACCTGGAGCGGAACGTGCGGGGGCCG
GTGCCGCGACGTTACGACTGGCCGCTGCCCTGGCCGCGCACTAAGCTGTTCAGTAGACTC
AGCTAG
Protein sequence:
MTQKRAPSVRPSCFVTVDMELFTVPSRKYVSICAIQSNGDWMTISARSPDKEPSPPKQIN
FAEPLVESVRVYLVNELPTKQLALVQRAPSPTTPSPPPSPRCHVDIATSTDREDIKGINF
EARLKRNDLNNNASRRRNDRREMPSQAELMQRQPLLARAVKADAPQATTDESDPDQDHSP
QRTHAGDFMVEIPAGTVREERYPKEIWKTILSFFFLFLCVCINMMSLSLVHERLPDRNTT
PPLNDIILDNVTAQDWGLAVSEYLIMISTTVAMIVVVFHKHRFIVARRLFFIIGLLYLYR
SVTMFVTVLPVSSKTYFCSPKSNSTTPLLVIKRMFYLISGFGLSINGKHTYCGDYIYSGH
TMVLVLSYLIVAEYSPKKLWPVHWAMWGSAVLGVSFVLLAHGHYTVDVVIAYYITTRLFW
TFHSLLVTPHRSGNGYNHYMIQREWWYWLFTYLERNVRGPVPRRYDWPLPWPRTKLFSRL
S