| New model in OGS2.0 | DPOGS200313 |
|---|---|
| Genomic Position | scaffold304:- 66140-71066 |
| See gene structure | |
| CDS Length | 564 |
| Paired RNAseq reads | 909 |
| Single RNAseq reads | 1902 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005612 (2e-61) |
| Best Drosophila hit | globin 1, isoform A (1e-11) |
| Best Human hit | cytoglobin (3e-10) |
| Best NR hit (blastp) | globin 1 [Bombyx mori] (9e-63) |
| Best NR hit (blastx) | globin 1 [Bombyx mori] (2e-60) |
| GeneOntology terms | GO:0020037 heme binding GO:0015671 oxygen transport GO:0019825 oxygen binding GO:0005506 iron ion binding GO:0046686 response to cadmium ion GO:0005344 oxygen transporter activity GO:0005737 cytoplasm GO:0046872 metal ion binding GO:0006810 transport |
| InterPro families | IPR009050 Globin-like IPR012292 Globin IPR000971 Globin, subset |
| Orthology group | MCL11150 |
Nucleotide sequence:
ATGGATCGCTCCAGCGATGATTGTTACTTAATCAAAGACAGTCAAGTTGTTATGGGGGGT
TTGTTAAATCGTATGTGGTGGGGAGGAGACCCGGATGGTGTGAACCCAGTATCTGGATTA
TCTCGTAGAGATGTGTTCGCTGTGCAGAAGTCCTGGGCGATTGTTTATGCCAATCCACTC
GCAAATGGCAGCGAGCTATTGAAAAGATATTTCCGAGCACATCCTGAAAGCAAAGAATTC
TTCAGAATGCTCCGCAAATTAAACGAAAATGAATTTGATGATAATCACCAGTTCAAGGCG
CATGTTATGAGTCTGATGAGCTCCTTGAATCTAGCCATAACCAACTTGGACCAGCCGGAG
ATAGTGGTGGCCATGATGAATAAGCTCGGCGAATCACACGGCAGGAGAAAAATTGACGAG
CAAAACTTCCATAATCTCAAAGGAATCATCGTTAAAATGTTCATCGACGTCTTAAAACTC
GACGACAAGAACCTCGCCTCCTGGGGTAAAGCGGTAGACTTCCTCTACAAACACATCTTC
GTAACTTTAAAACCAGAATCCTGA
Protein sequence:
MDRSSDDCYLIKDSQVVMGGLLNRMWWGGDPDGVNPVSGLSRRDVFAVQKSWAIVYANPL
ANGSELLKRYFRAHPESKEFFRMLRKLNENEFDDNHQFKAHVMSLMSSLNLAITNLDQPE
IVVAMMNKLGESHGRRKIDEQNFHNLKGIIVKMFIDVLKLDDKNLASWGKAVDFLYKHIF
VTLKPES