| New model in OGS2.0 | DPOGS208754 |
|---|---|
| Genomic Position | scaffold3221:- 9990-12546 |
| See gene structure | |
| CDS Length | 912 |
| Paired RNAseq reads | 214 |
| Single RNAseq reads | 552 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003414 (7e-84) |
| Best Drosophila hit | cyclophilin-33 (2e-106) |
| Best Human hit | peptidyl-prolyl cis-trans isomerase E isoform 1 (2e-104) |
| Best NR hit (blastp) | PREDICTED: similar to putative peptidyl-prolyl cis-trans isomerase E [Tribolium castaneum] (2e-140) |
| Best NR hit (blastx) | PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) isoform 1 [Apis mellifera] (2e-117) |
| GeneOntology terms | GO:0003755 peptidyl-prolyl cis-trans isomerase activity GO:0003729 mRNA binding GO:0006457 protein folding GO:0005634 nucleus GO:0003723 RNA binding GO:0000166 nucleotide binding GO:0006911 phagocytosis, engulfment GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR020892 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site IPR000504 RNA recognition motif domain IPR015891 Cyclophilin-like IPR016304 Peptidyl-prolyl cis-trans isomerase E |
| Orthology group | MCL13003 |
Nucleotide sequence:
ATGGCCAGCAAACCTAATTCAAAGCGAACTATTTATGTTGGTGGTTTAGCCGAAGAAGTC
GATGAAAAAATTTTAAATGCAGCTTTCATACCGTTTGGAGATCTTGTGGATGTCCAAATT
CCTCTGGATTATGAGTCAGAAAAGCATAGAGGGTTTGCATTTATTGAGTTTGAAAACGCA
GAGGATGCAGCGGCTGCAATCGACAACATGAATGATTCAGAACTATTTGGTCGAACAATC
AGAGTCAACATAGCAGCACCTCAACGCATCAAAGAAGGATCCACTCGTCCTGTGTGGTCG
GAAGACAGCTGGCTGCAGAAACATGCTGGTGGAACATTAAATGTGGATAAAGAAGATTCA
AATAATGCCAAGGAAAAGACTGAGGCTTCAAATGAGCCGGCTAAACCGATAGAAAAGCGC
AACCCTCAGGTATACTTCGACATAAGTGTGGGAAAGCAGGAGATCGGAAGAATCATAATG
ATGCTCAGAGCTGACGTAGTACCAAAAACCGCGGAGAACTTTAAGGCTCTGTGCACACAT
GAAAAAGGTTTCGGCTACCAGGGCAGCAGTTTTCATAGGATCATACCAGACTTTATGTGT
CAAGGCGGTGATTTTACGAACAACAATGGAACAGGTGGCAAATCGATATACGGAAGGAAG
TTTGAAGATGAGAATTTTACATTAAAACACACTGGTCCCGGTATACTTAGTATGGCCAAT
TCTGGACCTAACACCAACGGCTCTCAGTTCTTCCTTTGTACTGCCAAGACCGATTGGTTG
GATGGGAAGCATGTTGTTTTCGGTCACGTATTATCTGGACTCGACGTGCTGAAAAAGATG
GAGCGCTATGGGAGCAAGACTGGCGCTCCCTCAGCTAAGGTCGTCATAAGTAACTGTGGT
GAATTACAATGA
Protein sequence:
MASKPNSKRTIYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENA
EDAAAAIDNMNDSELFGRTIRVNIAAPQRIKEGSTRPVWSEDSWLQKHAGGTLNVDKEDS
NNAKEKTEASNEPAKPIEKRNPQVYFDISVGKQEIGRIIMMLRADVVPKTAENFKALCTH
EKGFGYQGSSFHRIIPDFMCQGGDFTNNNGTGGKSIYGRKFEDENFTLKHTGPGILSMAN
SGPNTNGSQFFLCTAKTDWLDGKHVVFGHVLSGLDVLKKMERYGSKTGAPSAKVVISNCG
ELQ