| New model in OGS2.0 | DPOGS216037 |
|---|---|
| Genomic Position | scaffold214:- 11706-17807 |
| See gene structure | |
| CDS Length | 3474 |
| Paired RNAseq reads | 3731 |
| Single RNAseq reads | 9152 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009017 (0.0) |
| Best Drosophila hit | RhoGAP92B (1e-10) |
| Best Human hit | rho GTPase-activating protein 20 (1e-21) |
| Best NR hit (blastp) | Rho GTPase regulating protein, putative [Pediculus humanus corporis] (8e-111) |
| Best NR hit (blastx) | Rho GTPase regulating protein, putative [Pediculus humanus corporis] (1e-96) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005622 intracellular GO:0007165 signal transduction GO:0017048 Rho GTPase binding GO:0035023 regulation of Rho protein signal transduction |
| InterPro families | IPR008936 Rho GTPase activation protein IPR000198 Rho GTPase-activating protein domain IPR011993 Pleckstrin homology-type |
| Orthology group | MCL17640 |
Nucleotide sequence:
ATGAACAGTAAAAAGTCTCACGGCCTGCGTTATAATACAATCGAACGTCTCGCGCAATAC
GAGCGGCTGGTGGGTGGGGGCTGTGGTCGGCGGCGCGCCGCTAGACTGTCGGACCTCGAG
CGCGTGCAGGACCTCTTCCCGCACGACTATCTCGCACTGCACGATGCGGACGCACCATCA
GCACTCGCATCTCATGGACAGAAGTCCAAAAGTCTTCGCAAACGTCCAAGTTTGGACATC
GGCGGCACAGTTAGTGGCAACAACAGTACGCTGTCGCCCCGCACCTTCATAATGGAAGCA
CCTGTCCAATTATGTCCTCTTGGATCCACCTCCCCACCGCTAGAACGCCATTTGTTTCTC
TTTAGTGACCTACTGCTTGTAGGAAAGTCTAGAGGAACTAACTGCTTTAAGTTAAAAGAG
AGTGTAAGGCTGGCAGAACTGTGGCTCTCCCTACCTGAAAGTGATGATACAGGTTTCCTC
ATCGGATGGCCAACAGTTAGCGGAGTCACAAATTACCTCGCTACGTATCCCACACAAGCT
GCTAGAGATACTTGGTACAGGAAAATCCAAAATGCTTTAACTGTCCAACTAGCCTCAGAA
CCAAAGTCAACAAACATTCAAATCTTCTATAAAGATGTAACGAGCTCCATAGAATTCTGT
AAGACGGTATGTATAAATCCAGAAATGAGCGCCCGTTGCGTGGTTCGCCAAGCGCTTCAA
GTTTTGCAAAATAATGGTGAGGTTGAGGGGGAAAACGATGGAGGTGGTGAGGAGGGCAGG
TTAGGGGCACCAGCCGACTTCACGCTCTGCATCCGCGCCACCCGGGACACCCCGCTATCC
CCCCTGCAAGGCATCGAACGACCGCATGCTGTTCAGATGTCAAAAATAAGGCAAACTTTA
TCTAATGAAGATGGTTTCGATTTGGAGCATGTTAACGCTAAAAATAATCCATGCGGATTA
GTTTTTGAGTTACGAAAGAAGAATCAAGGTCTAAAAAGTAACGTACCCCCCGGTCGCGGC
CTCCGTCTACTCAGACGCGGCGGTCGGTTGTTCGGTGTAGCGCTCACTCGTCTCTGTAAC
GGAACGCCGCCGCCCGCGCTGCTGCACGCGTTGAAAAGACTGCGGGTCACGGCACCACTC
ACGCATGGCGTCTTTAGAAGGAGCGCGAACGCTAAAGCCCTCAGACTGTTGAGGGATAAG
TTGGACGCTCTTGGTCCTTGGGCGGAGGGTGGTGTGGAATTGGAGCGAGCTCCGGTCCTG
CTTGTAGCGGCGCTGGTCAAAGAATTCTTTCGCGCACTGCCTCAGCCTCTCCTCGCTTCT
GAACTGTACCCTGCCTGGCTGCAGGTTCTCGGTTTGCCTCAAACGGAAAAAGTAAACGCC
GTGCGCTCCTTACTCTTGAAGCTTCCAAAATCACATTACAACATGTTAATGTACTTCGTT
TGCCTTTTACAAGCAATTGCTAAGAAATCTAATATTAATCTAATGTGTCCTATGAACTTG
GGTGTTTGTGTTGGTCCTAGTTTATTGTGGCCGAATGTTCCCTGTGACAAAGCTCCCAAA
GCAGTGCCATTGATAGTTGAACTACTTATAGTAAAAGCTGAGGCTCTTTTCGGCCCTCAA
GTAACTGGTCTTCTCGGAAACGGAAGCCCTGAATCATCTAACGCCCTTCTAGACTCTGGT
GCTGAAGAGAGTGATAGCCTTCATTCAGTTGGGATCTCCTTAGATTCCATGGAATTGTCG
ACACCCAGAAAAGAAAAATTATCATTAAGTAGAGACTCTGGTTTGACACTTTCAGAAGAT
GATTCAAATAGTAACGGGGGAAACAGTCCCGCACCTCGTAATATTTTACATAGTCTGTCT
GCACCAACTTGCAACATTCAACAAGATCCTAAGTTAAACTCGCGCTATACAAATGAAAAC
CCCAATGTCAATGGTCTACCAAAAATTCCCCAGAGGCAAAATAATATCTATTCCAATAAA
GCGGAAATGTACAGTACTGTTAATGAAGAACTTTACACAATACCATACATGGGAGAAAAA
TACGTTCATAATACGATTAATATCGGTATCTCAAATGGGATTGATGACAGAAATTATATA
TCGAAGACAGCAGTACAACGCTCAACCGCTGATATTTACGGTCAAAGTCCTGCGAAGTAT
ATTACTGGCTTAGAGCCTCAAAAACCGCCAAGAAGCAATGTTTCAAAAGCAGCAAGAACA
TCAAAAGTATACAGTATGTATGCTGAAACTCAAGAAACTGATAAAAATGTTACTAACAAA
AATTTCAATAGAGCTAAAAGCTCTGACAACTTATTAGAAGTAAAGCAAGAAGCTATGGAT
AAACAACGCGACATGGTTTCCAGTCAAGAAAATATTGTTTATAGCAACATTCACGACCTT
GCCATGTTTACGGAAAACATTCAACGGCAAAACCAATATCAAACACATGCGGAAATTAGA
AATAATTCAAATTATTCTCGTGTTTACACTGGTTGGGAAAACAAAAGCCCTAACTATTGT
GCAAACGGCCAAGTAAACTGTCAAAATGAGAACATTTACGGACAGATGACTAAGAATTCA
GGAGATTCCTCGCAAAACAAAACACCAGATGGGAAAACTACTCCGGCAGCCACCATTTTT
ACAAGAAATGACTGGTCTCGTCAAGCAGCGAGGACAAAAAGCTTAGAAGTGGGTGAAGAA
GGACACAGTAATGTTACAGAGAAATCTCGTAATACTAATTACGAAATAAACATTGTAAAC
TGTTGTCGAAAAAGACGGTTCGATCCTGCTCACCTGTGCACGAAGAATTGCATAACGCTC
TCGATGGTGCACAATCGAGACAAAGACAAACACGCGACTAATCAACAAAATTCTTATAAC
TACGTCGATGATATATCCAACAATTCTGATGAGAAGTGCAGAATTCGAAACTACAATAAC
AATAAACTGAATCAATCGAAGTCATTGGCAAATATAATATTACAGAGCGATTCAAGCAGT
AACGATACTTTATACCAACCGCAAAACTCATTTCATAGCCGGTCGACTGAATCAACGGCT
AGCGAAAATTCCTTCGAAAATTGCTACACGAGCCAATACATAGAGCCTCTGTACACGTCG
GTCTATAATAGAAGAAGGGATATATTTCACGAAGAAAAGAGCAACATATTCTCTTCGGAT
ATATACAAAGCGACACCCACATCAGTGAAACCGGATTATGCGTCTGAAAAGGAACAAAAC
AATAACAAGAAGCCATTAAACATGCCACCACCAGTTCCACCTAGAAAAATGGTATATCAA
AGGGTTTTAAAAAAGTTCCAACCAGTTCACGTGAACAAAGACGACAAGGCTACGCGTTCG
AAATCTGTGCCGCCTTTATACAGAGACCCACCTAATGGAACTGAGAAAAACGGACAAAAT
GGTGTGGCTCTCTACTGTTCGGAATCCGACACGGAATCGGAATCGTACGTGTAA
Protein sequence:
MNSKKSHGLRYNTIERLAQYERLVGGGCGRRRAARLSDLERVQDLFPHDYLALHDADAPS
ALASHGQKSKSLRKRPSLDIGGTVSGNNSTLSPRTFIMEAPVQLCPLGSTSPPLERHLFL
FSDLLLVGKSRGTNCFKLKESVRLAELWLSLPESDDTGFLIGWPTVSGVTNYLATYPTQA
ARDTWYRKIQNALTVQLASEPKSTNIQIFYKDVTSSIEFCKTVCINPEMSARCVVRQALQ
VLQNNGEVEGENDGGGEEGRLGAPADFTLCIRATRDTPLSPLQGIERPHAVQMSKIRQTL
SNEDGFDLEHVNAKNNPCGLVFELRKKNQGLKSNVPPGRGLRLLRRGGRLFGVALTRLCN
GTPPPALLHALKRLRVTAPLTHGVFRRSANAKALRLLRDKLDALGPWAEGGVELERAPVL
LVAALVKEFFRALPQPLLASELYPAWLQVLGLPQTEKVNAVRSLLLKLPKSHYNMLMYFV
CLLQAIAKKSNINLMCPMNLGVCVGPSLLWPNVPCDKAPKAVPLIVELLIVKAEALFGPQ
VTGLLGNGSPESSNALLDSGAEESDSLHSVGISLDSMELSTPRKEKLSLSRDSGLTLSED
DSNSNGGNSPAPRNILHSLSAPTCNIQQDPKLNSRYTNENPNVNGLPKIPQRQNNIYSNK
AEMYSTVNEELYTIPYMGEKYVHNTINIGISNGIDDRNYISKTAVQRSTADIYGQSPAKY
ITGLEPQKPPRSNVSKAARTSKVYSMYAETQETDKNVTNKNFNRAKSSDNLLEVKQEAMD
KQRDMVSSQENIVYSNIHDLAMFTENIQRQNQYQTHAEIRNNSNYSRVYTGWENKSPNYC
ANGQVNCQNENIYGQMTKNSGDSSQNKTPDGKTTPAATIFTRNDWSRQAARTKSLEVGEE
GHSNVTEKSRNTNYEINIVNCCRKRRFDPAHLCTKNCITLSMVHNRDKDKHATNQQNSYN
YVDDISNNSDEKCRIRNYNNNKLNQSKSLANIILQSDSSSNDTLYQPQNSFHSRSTESTA
SENSFENCYTSQYIEPLYTSVYNRRRDIFHEEKSNIFSSDIYKATPTSVKPDYASEKEQN
NNKKPLNMPPPVPPRKMVYQRVLKKFQPVHVNKDDKATRSKSVPPLYRDPPNGTEKNGQN
GVALYCSESDTESESYV