| New model in OGS2.0 | DPOGS209134 |
|---|---|
| Genomic Position | scaffold1600:- 11268-13858 |
| See gene structure | |
| CDS Length | 465 |
| Paired RNAseq reads | 2611 |
| Single RNAseq reads | 8293 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001307 (4e-71) |
| Best Drosophila hit | superoxide dismutase (2e-50) |
| Best Human hit | superoxide dismutase [Cu-Zn] (7e-44) |
| Best NR hit (blastp) | superoxide dismutase [Cu-Zn] [Bombyx mori] (8e-72) |
| Best NR hit (blastx) | superoxide dismutase [Cu-Zn] [Bombyx mori] (1e-74) |
| GeneOntology terms | GO:0019430 removal of superoxide radicals GO:0004784 superoxide dismutase activity GO:0008340 determination of adult lifespan GO:0005737 cytoplasm GO:0006801 superoxide metabolic process GO:0016209 antioxidant activity GO:0007568 aging GO:0055114 oxidation reduction GO:0046872 metal ion binding GO:0006979 response to oxidative stress |
| InterPro families | IPR001424 Superoxide dismutase, copper/zinc binding IPR018152 Superoxide dismutase, copper/zinc, binding site |
| Orthology group | MCL14324 |
Nucleotide sequence:
ATGCCGGCCAAAGCGGTTTGCGTTCTCAATGGAGATGTTAGCGGCACTGTTTTCTTCGAT
CAGAAGGACGACAAAGCCCCAGTTGTCGTGACGGGTGAAGTGAAAGGGCTTTCAAAGGGC
AAGCACGGTTTCCACATCCATGAGTTTGGGGACAACACAAACGGCTGCACATCGGCCGGA
CCTCACTTCAATCCACAGAAGCAAGACCACGGTGCCCCTGATGCTGCTATCCGACATGTC
GGAGACCTTGGAAATATTGAAGCCGGCAGTGACGGAGGTGTCACTAAGGTATGCATCCAA
GATTCCCAGATCTCTCTGTGCGGCCCGAATAGCATCATTGGCCGTACTCTGGTTGTGCAC
GCTGATCCTGACGACCTCGGCATCGGCGGTCATGAACTGAGCAAGACGACTGGCAATGCC
GGAGCTCGGGTCGCTTGTGGGGTTATTGGCCTCGCTAAGATCTAA
Protein sequence:
MPAKAVCVLNGDVSGTVFFDQKDDKAPVVVTGEVKGLSKGKHGFHIHEFGDNTNGCTSAG
PHFNPQKQDHGAPDAAIRHVGDLGNIEAGSDGGVTKVCIQDSQISLCGPNSIIGRTLVVH
ADPDDLGIGGHELSKTTGNAGARVACGVIGLAKI