| New model in OGS2.0 | DPOGS204365 |
|---|---|
| Genomic Position | scaffold2527:- 8890-9852 |
| See gene structure | |
| CDS Length | 963 |
| Paired RNAseq reads | 170 |
| Single RNAseq reads | 466 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005888 (5e-149) |
| Best Drosophila hit | found in neurons, isoform A (2e-98) |
| Best Human hit | ELAV-like protein 4 isoform 3 (1e-89) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004718 [Tribolium castaneum] (2e-125) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004718 [Tribolium castaneum] (5e-109) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0003723 RNA binding |
| InterPro families | IPR006548 Splicing factor ELAV/HuD IPR000504 RNA recognition motif domain IPR002343 Paraneoplastic encephalomyelitis antigen IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL40011 |
Nucleotide sequence:
ATGTCCCAAGAAGAAATCAGATCACTTTTTTCAAGTGTCGGCGAAGTGGAAAGTTGCAAG
TTAATAAGAGATAAAGTTACTGTTTTTCCTGATCACATTCTTAATGGCCAAAGTCTCGGG
TATGCATTCGTCAATTACCATAAGCCTGAAGATGCCGAAAAAGCTGTGAACACACTGAAT
GGTCTACGATTACAGAACAAAATTATAAAAGTGTCGTACGCTCGTCCCAGCTCAGATGCT
ATAAAAGGCGCTAATCTTTACGTTTCTGGTCTCCCTAAGCACATGACGCAGCAGGATTTG
GAGAAGTTATTCAGTCCGTTCGGTACAATAATAAGTTCGCGCATCTTACACGAAAACATG
AACGTCGGGCATTTATTGCAAGGGGGCATGGAAGAACAAGGGATTCAAGGACCTTCCAGA
GGGGTTGCATTTATTCGTTACGATCAAAGAATTGAAGCTGAGAATGCTATAAGAGAGTTA
AATGGCACTATACCGCCTGGAGGTACGGGTCCCATTACAGTGAAATGTGCAAACAATCCC
AGTAACCAAAACAAGGCCCTTGCACCGCTGGCTACGTACTTAGCACCACCCACCGTCCGT
CGCTTCTTAGGGCCCGCTGGTAAGGCTCTGCTTGCCATTAATAAAGGACTTCAACGATAC
TCGCCGCTTGCGGATCCTCTCGTCCAAGGTAACGCATTAGGCGGTTCAGGTTGGTGCATT
TTTGTTTACAATATCGGTGCCGATACAGAAGAAAGTGTGCTATGGCAGCTGTTTGGCCCC
TTCGGAGCCGTTCAGAGTGTTAAAATTATAAGAGATCCCACCACCAACAAGTGCAAAGGC
TACGGTTTCGTTACTATGACCAACTACGACGAGGCTGTAGTTGCCATCCAGTCATTGAAT
GGCTATTCCCTCAATGGACAAGTGCTGCAAGTCAGCTTCAAAACAAACAAGAGTAAATCC
TAA
Protein sequence:
MSQEEIRSLFSSVGEVESCKLIRDKVTVFPDHILNGQSLGYAFVNYHKPEDAEKAVNTLN
GLRLQNKIIKVSYARPSSDAIKGANLYVSGLPKHMTQQDLEKLFSPFGTIISSRILHENM
NVGHLLQGGMEEQGIQGPSRGVAFIRYDQRIEAENAIRELNGTIPPGGTGPITVKCANNP
SNQNKALAPLATYLAPPTVRRFLGPAGKALLAINKGLQRYSPLADPLVQGNALGGSGWCI
FVYNIGADTEESVLWQLFGPFGAVQSVKIIRDPTTNKCKGYGFVTMTNYDEAVVAIQSLN
GYSLNGQVLQVSFKTNKSKS