| New model in OGS2.0 | DPOGS213525 |
|---|---|
| Genomic Position | scaffold772:- 27541-35167 |
| See gene structure | |
| CDS Length | 2457 |
| Paired RNAseq reads | 2816 |
| Single RNAseq reads | 8434 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011807 (0.0) |
| Best Drosophila hit | shaker cognate b, isoform C (0.0) |
| Best Human hit | potassium voltage-gated channel subfamily B member 1 (3e-178) |
| Best NR hit (blastp) | PREDICTED: similar to Shaker cognate b CG1066-PA, isoform A [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Shaker cognate b CG1066-PA, isoform A [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0006813 potassium ion transport GO:0016021 integral to membrane GO:0005249 voltage-gated potassium channel activity GO:0008076 voltage-gated potassium channel complex GO:0007268 synaptic transmission GO:0055085 transmembrane transport GO:0005515 protein binding GO:0005251 delayed rectifier potassium channel activity GO:0060025 regulation of synaptic activity GO:0001508 regulation of action potential GO:0008345 larval locomotory behavior GO:0008016 regulation of heart contraction |
| InterPro families | IPR003091 Voltage-dependent potassium channel IPR003971 Potassium channel, voltage dependent, Kv9 IPR003968 Potassium channel, voltage dependent, Kv IPR011333 BTB/POZ fold IPR000210 BTB/POZ-like IPR005821 Ion transport IPR003131 Potassium channel, voltage dependent, Kv, tetramerisation |
| Orthology group | MCL10963 |
Nucleotide sequence:
ATGTCATCTTTACCTCCCGAGCCTTTTATGATGCTTCGGGCGAAAGCTCTCAGTAAGCGG
GTGATCATTAATGTTGGTGGTGTCCGTCATGAAGTTTTGTGGCGAACCCTCGAGCGTCTT
CCTCACACTCGTCTCGGAAGACTTCGAGACTGCAACACGCACGAGGCTATAACCGAACTC
TGCGATGATTACTCCTTGCAGGATAATGAGTACTTCTTTGACAGACATCCGAAGAGTTTT
AGTTCAATTCTAAACTTTTACCGAACTGGCAAGTTACATTTAGTGGATGAGATGTGCGTG
TTGGCGTTTAGTGATGACCTCGAGTACTGGGGCGTGGATGAACTGTATCTGGAGTCGTGC
TGCCAGCACAAGTACCACCAGCGCAAGGAACATGTTCACGAGGAGATGCGAAAAGAAGCT
GAAAGCTTGCGACAGAGAGAAGAAGAGGAATTCGGACAGGGCACTTGTGCCCAATACCAG
AAGTGGCTGTGGGATCTACTTGAAAAACCTACAACGAGTATCGCTGCTCGGGTGATCGCA
GTTATTTCGATCCTCTTCATCGTGCTGTCCACAATAGGGCTCACTCTGAACACCATTCCT
CAAATGCAAATGTACGACGAGAAGGGCACACCCATGGACAACCCGCAGCTGGCCATGGTT
GAGGCGGTCTGCATCACGTGGTTTACCCTCGAGTACGTGTTGCGGTTTAGTGCCTCGCCG
GATAAATGGAAATTCTTCAAAGGTGGACTGAACGTAATTGATTTGTTGGCTATCTTGCCA
TATTTCGTGTCTCTTTTTCTACTCGAAACCAATAAGAACGCGACAGATCAATTTCAAGAC
GTGCGTCGTGTTGTACAAATCTTTCGTATCATGCGAATATTGCGTATCCTAAAATTAGCC
CGACACTCCACCGGGCTGCAATCGCTCGGCTTTACTCTCAGGAATTCGTACAAAGAACTT
GGACTGCTCATGTTGTTTCTTGCGATGGGAGTGCTTATATTTTCCTCACTGGCATACTTT
GCCGAAAAGGAAGAACCGGGAACTAAATTTATTTCCATTCCGGAAACGTTCTGGTGGGCC
GGCATCACCATGACCACAGTCGGATACGGTGACATTTACCCCACGACCCCGTTGGGCAAG
GTCATCGGCTCAGTTTGCTGTATTTGCGGCGTGTTGGTAATTGCGTTACCCATTCCCATT
ATCGTCAACAATTTCGCCGAGTTTTACAAGAATCAGATGCGGCGTGAAAAAGCTCTCAAG
CGACGCGAGGCCCTCGAGCGTGCAAAGCGCGAGGGCTCCATAGTCTCCTTCCACCACATT
AACTTGCGCGACGCCTTCGCCAAGAGCATGGACCTCATAGACGTCATAGTAGACACAGGA
CATAACCTGTCACAAGCGGACGCGACTAGCCTGGAAGGCGAAGCGCCGGCCACCACAGGT
TGTTACAAGCAATACGAACATGCAATGGCCAATAAGATAGCGCAGGCGACTGATCCTAAT
CAGACCAGTCCTAATAAGGACCTTCGCTATTCTACAGAGGGCTTGGGCACGCCGGAGAAA
CGCTTGCTTATTAACCCAGAACCGACTCCAGAAAAGAAGATGGCTGAAAAACAGCTTGAC
TTGGATCAGCTGCCTTCTGAGTTTGAATGTTGTTTTTGCACGTTCAAGGGTTACAAAGAG
TTCATAGACGCCGAGCAACTGATGCCCATGGCCACGTCGGATCTTCGACAACCTGTGTGC
GTGGAGTTGGCCTGCTTACAACGCCACCCGGCGCCTCGTGCCTTACCAGAAGCGACACCC
AACAGCCTTGACAGTCCTGAGGGCGACATCACGGGTGAGAACGACTCCTCAAACTTGTAT
GTGAATCCTTTGGATGGTAGCGGTGGTGGCGGGGGCGGGGGCGGGGAAAGGGTTTCTGCT
GAATTTAACGGTGTGCGCAAGAGCGCTTCAGGGGAAGGGAGCGTATTGTGTGCGAAAGGT
TCGCAGGGCGAAGTCTCGCCGCGCGGCTCGCGTGGCAGTCTGTCGGGTGTGGGATGTGGT
GAGGCGTTAGTTGAGGCTTCGTTGTCGACACAACCACAGGCGGATGACTTGCCCGCCGCC
ACCGACGACGCCAAGCCTAAACACAGAAAAGCGCGCTTCCAACAGGAATGGTCCGAGGAG
GAAAAGAGGCCGCCGAGAGGGATAGCGACGAGAATTATCAATCATCACATTCTATTTGGT
AAAAATGGTAACAAGCGTGGAGGTGGCGGGTGGCCTCTAGAGAGTGACTCAAGATCCAGA
TCTATTCTCAAGAATAAAGAGGCTCGCGGCACCGACAGCGAACTGCTCCTGCAAGAGACT
ACATCTCTTGGTGCCAATGGCGACTCGGGCAGCGAGTCCTCACCCATTCGCCTCAAAGAC
TTCAAGGGCCAGAATCACAAAGGCGGTACCACCGACCGAAGCAACCTCGTGTCGTAA
Protein sequence:
MSSLPPEPFMMLRAKALSKRVIINVGGVRHEVLWRTLERLPHTRLGRLRDCNTHEAITEL
CDDYSLQDNEYFFDRHPKSFSSILNFYRTGKLHLVDEMCVLAFSDDLEYWGVDELYLESC
CQHKYHQRKEHVHEEMRKEAESLRQREEEEFGQGTCAQYQKWLWDLLEKPTTSIAARVIA
VISILFIVLSTIGLTLNTIPQMQMYDEKGTPMDNPQLAMVEAVCITWFTLEYVLRFSASP
DKWKFFKGGLNVIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQIFRIMRILRILKLA
RHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKEEPGTKFISIPETFWWA
GITMTTVGYGDIYPTTPLGKVIGSVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALK
RREALERAKREGSIVSFHHINLRDAFAKSMDLIDVIVDTGHNLSQADATSLEGEAPATTG
CYKQYEHAMANKIAQATDPNQTSPNKDLRYSTEGLGTPEKRLLINPEPTPEKKMAEKQLD
LDQLPSEFECCFCTFKGYKEFIDAEQLMPMATSDLRQPVCVELACLQRHPAPRALPEATP
NSLDSPEGDITGENDSSNLYVNPLDGSGGGGGGGGERVSAEFNGVRKSASGEGSVLCAKG
SQGEVSPRGSRGSLSGVGCGEALVEASLSTQPQADDLPAATDDAKPKHRKARFQQEWSEE
EKRPPRGIATRIINHHILFGKNGNKRGGGGWPLESDSRSRSILKNKEARGTDSELLLQET
TSLGANGDSGSESSPIRLKDFKGQNHKGGTTDRSNLVS