| New model in OGS2.0 | DPOGS213605 |
|---|---|
| Genomic Position | scaffold772:+ 675-1263 |
| See gene structure | |
| CDS Length | 513 |
| Paired RNAseq reads | 87 |
| Single RNAseq reads | 273 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011667 (1e-62) |
| Best Drosophila hit | CG5316, isoform B (1e-33) |
| Best Human hit | aprataxin isoform e (1e-30) |
| Best NR hit (blastp) | PREDICTED: similar to FHA-HIT [Nasonia vitripennis] (2e-40) |
| Best NR hit (blastx) | GJ22721 [Drosophila virilis] (9e-43) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0008270 zinc ion binding GO:0003684 damaged DNA binding GO:0000012 single strand break repair GO:0005634 nucleus GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR001310 Histidine triad (HIT) protein IPR019808 Histidine triad, conserved site IPR011151 Histidine triad motif IPR011146 Histidine triad-like motif |
| Orthology group | MCL12586 |
Nucleotide sequence:
ATGAAGGACCCAAAATCTATATATAAAGAAACAGAAAATGTTGTTGTCATACATGATAAA
TATCCAAAAGCTAAAATTCATTATCTCGTATTGCCCCGGGATGAAATTAGTAGTATATTT
AAGTTGAACAAGTCACACATAACTCTCTTAAAAGAATTTGGTTCTATATTTCACACTATT
ATGGAAGACCACAAAAATAACACTTTGCGAGCTGGTTTTCATGCAGTTCCTAGTATGCAA
AGGCTTCATATGCATATTATCAGCACAGACATGAATTCTGAATGCCTGAAAACTAAAGTA
CACTGGAACAGCTTCACCACTAGCTTTTTTATTCCATATGATGATTTATTAAAGACACTC
GAAGAAGATGGTGTAATACAAAAAATATCCAGTGACACACATAAATCTCTGTTATCTCAA
CCTCTGAAATGCAATCAGTGCGAGTTCACCCCAAAAAACATGCCACAGTTGAAACAACAT
TTATTAAGTCATGTAAATAAAAACCATTTATAA
Protein sequence:
MKDPKSIYKETENVVVIHDKYPKAKIHYLVLPRDEISSIFKLNKSHITLLKEFGSIFHTI
MEDHKNNTLRAGFHAVPSMQRLHMHIISTDMNSECLKTKVHWNSFTTSFFIPYDDLLKTL
EEDGVIQKISSDTHKSLLSQPLKCNQCEFTPKNMPQLKQHLLSHVNKNHL