| New model in OGS2.0 | DPOGS213606 |
|---|---|
| Genomic Position | scaffold772:+ 6283-16607 |
| See gene structure | |
| CDS Length | 639 |
| Paired RNAseq reads | 53 |
| Single RNAseq reads | 129 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011668 (3e-62) |
| Best Drosophila hit | Sox100B (9e-27) |
| Best Human hit | transcription factor SOX-9 (6e-32) |
| Best NR hit (blastp) | PREDICTED: similar to SRY-box containing gene 10 [Apis mellifera] (4e-33) |
| Best NR hit (blastx) | PREDICTED: similar to SRY-box containing gene 8 [Nasonia vitripennis] (1e-25) |
| GeneOntology terms | GO:0003702 RNA polymerase II transcription factor activity GO:0005737 cytoplasm GO:0016481 negative regulation of transcription GO:0033690 positive regulation of osteoblast proliferation GO:0010628 positive regulation of gene expression GO:0003700 sequence-specific DNA binding transcription factor activity GO:0010817 regulation of hormone levels GO:0043565 sequence-specific DNA binding GO:0048709 oligodendrocyte differentiation GO:0001701 in utero embryonic development GO:0048469 cell maturation GO:0060009 Sertoli cell development GO:0005634 nucleus GO:0001649 osteoblast differentiation GO:0007422 peripheral nervous system development GO:0045662 negative regulation of myoblast differentiation GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0007283 spermatogenesis GO:0005515 protein binding GO:0008584 male gonad development GO:0045165 cell fate commitment GO:0045444 fat cell differentiation GO:0060612 adipose tissue development |
| InterPro families | IPR000910 High mobility group, HMG1/HMG2 IPR009071 High mobility group, superfamily |
| Orthology group | MCL17858 |
Nucleotide sequence:
ATGAGCTGGGATCAGGACAGACCCGAGAAGCTGGAGATCAATGAAGCTGTCGGCAAGCTG
CTGCAGTCATTCAACTATGATACTATCGTGCCGCAGCCCAGCAAGGGCGGCGGTTGCATG
CGGCGGGCTCATGTGAAGCGCCCCATGAATGCTTTCATGGTGTTCGCACAGGCAATGCGT
CGTAGGTTGTCTGAACAACGGCCGTCACTGCACAACGCTGAACTGAGCAAATCCCTGGGA
TCCATGTGGAAGAGCTTGAGCGAAATGGAAAAGCTACCGTTTGTTAAGGAAGCCGAAAAA
CTACGGACTCAGCACAAACGTGAGTACCCCGACTATAAATACCAACCTAGACGTCGCAAG
CCACCGCCTACAGCATCCACGAGACTAAAACGGGAACCTACACCAGAAAGATCTCAAATC
GATTTCTCCCGCATCGAAGTCGATGGCGCCTTACTAGCTGACGGACCGCCAGATGGCGCT
GAGCTCGACCAGTATCTGAAACCAGTACCAGTGCCGGACTACCACGAGATGCAGCCACGC
TACACCCACACCTTATCCCATCACCCACCAGGGCTGTATACCCCTGTGCCGTCACATTTA
CACCCTCCATGTGACTGGCAACACTACCCGCATCCATAA
Protein sequence:
MSWDQDRPEKLEINEAVGKLLQSFNYDTIVPQPSKGGGCMRRAHVKRPMNAFMVFAQAMR
RRLSEQRPSLHNAELSKSLGSMWKSLSEMEKLPFVKEAEKLRTQHKREYPDYKYQPRRRK
PPPTASTRLKREPTPERSQIDFSRIEVDGALLADGPPDGAELDQYLKPVPVPDYHEMQPR
YTHTLSHHPPGLYTPVPSHLHPPCDWQHYPHP