| New model in OGS2.0 | DPOGS213860 |
|---|---|
| Genomic Position | scaffold3220:+ 8143-13986 |
| See gene structure | |
| CDS Length | 5199 |
| Paired RNAseq reads | 1196 |
| Single RNAseq reads | 2673 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009774 (0.0) |
| Best Drosophila hit | CG31755 (3e-28) |
| Best Human hit | tudor and KH domain-containing protein isoform b (7e-11) |
| Best NR hit (blastp) | RNA helicase-like protein [Bombyx mori] (1e-145) |
| Best NR hit (blastx) | RNA helicase-like protein [Bombyx mori] (4e-141) |
| GeneOntology terms | GO:0004004 ATP-dependent RNA helicase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding |
| InterPro families | IPR014001 DEAD-like helicase IPR002999 Tudor domain IPR008978 HSP20-like chaperone IPR008191 Maternal tudor protein IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR018351 Tudor subgroup IPR007052 CS-like domain |
| Orthology group | MCL10801 |
Nucleotide sequence:
ATGCCAACGGATTGTTATAGAGTAGATGTGATCCATTATTTAAATCCGTCTTTAATATGG
GTGGAAGTATGTGATTCCCTAGTGAGTGTAGATGAATTTGTTTTTGAACAAATCGGCATT
TACGGTATTGTACCCCATGAAACTACTATTGATATAGAACTTGAAAGTATTGTCTCAGCT
CAATGTACTGATTGGGTTTCTGCGGCGAATACAATTTTAAAAAATCTTTTGTGTAAGTCC
GAAGAAGTATGGTTTCTACCAACGTACATAGATAGAAGATCTTCCATATTTGATGACAAC
ATACACAAGTATGGAGAATTAATACTCAAAAATAGTGATGGAAAACTGAAGAAGGTTTCA
AAATATTTAGTTAAATCTGGTTTTGCTGAAATGAATGTTTCGAAATTTCACAGTCAACTC
AACAACGGTGAATTAAACACTAAACTGGAGTTCATACAAACACAAGAAGTTATAAAACAA
TTAGAGAAGCATTACACAAAGTCATCTAAAAAGAAAGAGTGGGAGAAATTTGTGAGAAAA
CAGACATCGGTATTCCAAATGAAACAGAAATTTGAATCCGAGTTAACAGTATCAAATCTA
GAAAAACATAATAATATAATGATAAAGAGAGTCATAGAAAATAAGAGTAACGATTTTGAA
CTTTGTAAAGATGTTAACGAGAAACCATTAGGTCGAGGCTTCCATAAAGCTGATTCTATT
AAGAGTGAGTTAAAATCAAAATTATTAAAAAAGAAGACGTCATATCACGATAAAACATCA
TTCGATGATATTAAACGTTTCCTCGACAAAAATTCAAGATCGAAGGATGAGGATACAGAA
TCAAGTGAGCCAGATCACAATCAGAATGGTTTGAGATTTTTAAGCGGAAGGCTGGGAAAG
ACGCATAATACAGAACAGAAGGTTCTGGCACACGACAGAGCCAGGATACAAATGGCTGCA
AAAGCTTGTGACGATTCATATCAATATGATGACCATGGAAAATCGATACAAAAAAGATTT
ACAAAAATCAAAGGAGATAAAAAAAATTCAGAAAAACTTGTAGCATTTGGACCTCCAGAT
CTGGATCCTTTTAAGATGAAGGTTGAGAAATTACCTGCTATTGATCATAAAGGTGCTGAT
CAAGAACTTTTAAAAGAAGATTGTATAGACAAAGAAGATTTTGATAAAATTGATTCTGAT
ATGTCCAAACACATTTGTGATAATTTGGTTCATATTGATGCTAGAGCCAGTGACAGTGAT
CAAACAGTACTGAGTTCAGTATTACAACGTCGTTTGAAAGCTCGCGTCAGTGTTAGGAAT
AATGAAAGCAGTATATCAAGCTCAGATACGAATACAGAATCGTCTAGTGCGGGCGAAAAC
AAGGAATCCTTTGACGACGATGAAGTTTTGGAAATTATCGGTAAAAGGTACACACAATGC
CCATCACTAAAAGTCGATAATGTTAGTGATTCCGTCGATATAAGTTTGAAAAATAACGTG
AATCCATTCAAGAATGTCGATTCCGGCTTATCCGTGTTTGTCGATAAATTAGTGACACCC
GTTTTAATGGTTCATTCGAAAAGCAATAAGCGCATCGAACCCGTCTTCCAGATGAGAGAC
ATACATTTTAATGACCACATACGACTCGTCCTAAGAAACATGAACGTCGAGAAGCTCATG
ATGGTGCAGACAGTATCTTGGAATGCGATTTTGAGGGGTTTCAGTGTGTTCATGGTCAAT
CCCATGGGTAGTGGCAAGACTATGGGTTATTTGCCTGCCGTTTGTCGGCTAGTTAGTGAC
GGTGGTGGCGATATATCGACTAGTTCAGGCCCTATGTGTATTATAGTCTGCGCTACGGCG
AAATCTGTGGTAGAGGTCGAGAGATTGGCTAAAATGTTCCTTGGCTTGGATGAAAGAGTC
GTGGCATGCTATGCGGGCGTCGATGATGCGTATATAACAACAGCTTTATTGAATGGATGT
GATTTATTCATTAGTACCCCGCCGGCTTTAGCTCGATTGTTAAGGGTAAACGATTTTGGT
ATCGATTTGAGACGCCTCTCGATGTACGTTCTAGACGATTGTGAGCGATTAACGCAAACC
TACAACGATGAACTGAAATTCTTTCAAATTAAAATCAACTCGATGCTGAAATATCGAGTT
AATAAAGAGTTAAAAGTGCAATATATTATTGCGTCACGCTGCTGGTGTGACTTCATGGCA
CCGTTGGCAAAAAAAGCACCTGACACGATAATTTGTATCGGAGCATTCCAAGAATGTGTT
ATTTATTCAAAGGCGAATACATCGGTCAGCTTTATTAATAGTGAAAAAAAATTGGAGCAT
GTCTTCGAATTCTTGGAAACCATAGACGCTTCAAAGAGAACTGTCATAGTTTGTGCCGAT
AACGATGAAGTGGAAGTGTTGCAAACAGCTTTGAGAAATACAAAACGCATTGTTTTTGCT
TGTGATAACAATATGACCGTTCATGATTTGTACAGTTTAAGCGAGTCGTGGGCAGATTAC
CAAGAACCTGTTTCAGGACCTATCCTTGTGTGTTGTGATGGCAACTTGACCCATATGAAT
ATAACAGACGCTCACCATCTTATACATTACTCGATGCCGCAATATTTTTCTACGTTTTGC
AAGCGTTTCTCTGTTTTAAATGACAACTATCCGTCGATTTTCAAAGCGATTAATGATAAT
GTTAAAATTAAAATACTTTTAGAGGAGAGTAACGCGCAACAGCTGCCAAAAATCGTTAAT
TTTATCAGACGGTGCACAGAAAACCTCCCAACGTTCTTAAATGATGTTTGTGCCACTATT
AATACTAACAAAGATTTGATGAAAGCTCAAAAATTGGTTCCACTTTGCGATAACTTACTT
CAACTGGGCGATTGTCCAGATTTCTATAACTGCCACGAAAGGCATACAATATTGAAAGAT
GCAGATACGCCCAAAGAGTGGGTGCCGAGAAACGGTGTAATAACCTTCAAAATAATACAT
TATCATACAGCAACCTTATACTCAGCCAGACTTTTAACTGTGACTGTTAATGGCACGACT
TCTAAGTTTCCTCAAACATACAGTACGCTTTCATTAAAAATGGGTATGTATTTTGCCAAC
GAAACTCATAGAAAATTGCACGGTATGCCAGAAATTGGTGATATTTGTGCTGTAGCTATG
AAAGTTAATTTCTACGCGAGATGTCAAGTACTTAAAATATTGTCTCGGTATCAGAGAGGC
AATCCGAACAAGGTACTGGTAAGGCTTGTTGACGAAGAAAAGCTTGAAATAACGAGAGAC
ATATATCTTTACTATTTGCCGGACGATTTGAAAGAGATAGAAACGAAAGTTGTTCAAGTA
AGACTTGCTAATTTAGAACCCAAAGACAGGGATATAACTTTCTCTGATCTTGCCCGAGAT
CACTTGAAGAAATTAACGGATGCTGATGATGAGTTGTTTATGAGAGGTCAAGTGTCACTG
GCGGTCGGAAATTGTGTTTTTGTGACCACTCTTGAGGCTTGCCAAGATTTGTCATCTGTG
AGCGAAATGGTCGTGAAGTACAATTTTAAGCATGAACTTGTAAGGAATCATGCTCTTATA
AATTCTGAACATTTAAACAAAATTGAAGCCCTTTGCAAAAAAAGCGGATTGAATGTTACG
GATAGTACATTTGATGATATAAAAGCTAAAGACCTTCCGTTGAAAAATCCCCAAAATGTT
TCCTGGGCTCATTTAGACAGCGAAGAAATGAACTCTGTGTTTTTTGCTTCCGCCATAAAT
CCAGGAAACTTCTTTGTACGTTTGGAAAAATTCGAATCCTGCATGATTAGTCTGTTAGAA
GATATAAAGGCTCACGTTGAAAATAACACAGAAAAAATCTGTGATATAAAAGAAGGTGAT
ATAGTTTTGGCTGAGTTCCCCGACGATTCTACATACGAGAGAGCTAGAATTGATAACGTA
AACGGAAACAGAGTAAAATGCTTCTTCGTGGACCAAGGCGATTGGAGGGAGATCGATATA
AAAAGCCTTGTTCAAATACCAGATAGATTCTTAAAGAAATTACCGTTTCAGGCTATCGAA
TGTCGATTGGTCGGTGTAAAACCATTAGGCGAAGAATGGACCGACTTCAGTACGAACTGG
TTTCATGATAATTGCTTTGAAGGTAGCAGTGAAAATTTAAAATATTTATTTGTTAAGTAT
TTCACGAAAGAACCAGCGAAATACACTGGCGGTAACAAATATGGCGTGGTCTTAATAGAC
ACTAACACGGAACAAGACGTCATTATAAACGAACTAATGATTGATCTAAATCTAGCTCGA
CAACACGAAGAGGAATTAAAGCATTTTGACAATATTTACACAGAGTTAAAGAAAGATACA
CATAAGTTGCAGACTGATAAAGAAGAGAATTGTGAAAATACAGCGAGTGAGACTAAGGTT
GTGAGTAACTCTAGCATTCCACAGCCTATACGTTCAGTACCTTTAATAAATTCGGATGAA
GAATCCGATGATTCAGATAAATGGGAAGTTCACATCAGCGCTGATAACGCTGCGGCATTG
TTTGGGACGGTGGCAAATAAATGTGCGATCACTAATTCCGATAGTGCAAAAACACCACAA
ACATCTTACGAAATGATTTCTCCGTGTGAAAGAAGCAAAGCTATTACACAGGAATTAGAC
TCGGATGACTTAACGTCGCCGGAGCTATCTGAAATATCGAAGACGCCAGTCAAACGGAAC
GTTGTTAAGGAATTAGATCAAAAACGACATCCAAAGATAATGTGGCATCAAAATAAAAGC
ACAATATACGTTAAAATACATTTAGTTGTCGACAATTACGATTTACTCATCGACGACAGA
AAATTAGAATTCCTCGCTTTAACAAACGACATAAAATACGGATTCGACTTAGAACTGTTT
GGTGTTGTTAAAACTGAGAATTCTACGCACGTCAACAAAGGACAGTATGTGTTAGTTAAA
CTAGCGAAAGTTCTGAACAAGAGCTGGCTAACGCTCACTCGGAACGGCGACACGAAGTGG
GTAGTTTACGACGTGGACTTCATTGACACGTCGTCAGACGAAGAAGTTGTTGACAGAAGC
TCGGTTATGAATATTGTTATAAGTTTAAACGACAACGCGGACACGGATACTGACGACGAG
CAATTCTGTGATGATGCGAATTTTACATACAAAAAATAG
Protein sequence:
MPTDCYRVDVIHYLNPSLIWVEVCDSLVSVDEFVFEQIGIYGIVPHETTIDIELESIVSA
QCTDWVSAANTILKNLLCKSEEVWFLPTYIDRRSSIFDDNIHKYGELILKNSDGKLKKVS
KYLVKSGFAEMNVSKFHSQLNNGELNTKLEFIQTQEVIKQLEKHYTKSSKKKEWEKFVRK
QTSVFQMKQKFESELTVSNLEKHNNIMIKRVIENKSNDFELCKDVNEKPLGRGFHKADSI
KSELKSKLLKKKTSYHDKTSFDDIKRFLDKNSRSKDEDTESSEPDHNQNGLRFLSGRLGK
THNTEQKVLAHDRARIQMAAKACDDSYQYDDHGKSIQKRFTKIKGDKKNSEKLVAFGPPD
LDPFKMKVEKLPAIDHKGADQELLKEDCIDKEDFDKIDSDMSKHICDNLVHIDARASDSD
QTVLSSVLQRRLKARVSVRNNESSISSSDTNTESSSAGENKESFDDDEVLEIIGKRYTQC
PSLKVDNVSDSVDISLKNNVNPFKNVDSGLSVFVDKLVTPVLMVHSKSNKRIEPVFQMRD
IHFNDHIRLVLRNMNVEKLMMVQTVSWNAILRGFSVFMVNPMGSGKTMGYLPAVCRLVSD
GGGDISTSSGPMCIIVCATAKSVVEVERLAKMFLGLDERVVACYAGVDDAYITTALLNGC
DLFISTPPALARLLRVNDFGIDLRRLSMYVLDDCERLTQTYNDELKFFQIKINSMLKYRV
NKELKVQYIIASRCWCDFMAPLAKKAPDTIICIGAFQECVIYSKANTSVSFINSEKKLEH
VFEFLETIDASKRTVIVCADNDEVEVLQTALRNTKRIVFACDNNMTVHDLYSLSESWADY
QEPVSGPILVCCDGNLTHMNITDAHHLIHYSMPQYFSTFCKRFSVLNDNYPSIFKAINDN
VKIKILLEESNAQQLPKIVNFIRRCTENLPTFLNDVCATINTNKDLMKAQKLVPLCDNLL
QLGDCPDFYNCHERHTILKDADTPKEWVPRNGVITFKIIHYHTATLYSARLLTVTVNGTT
SKFPQTYSTLSLKMGMYFANETHRKLHGMPEIGDICAVAMKVNFYARCQVLKILSRYQRG
NPNKVLVRLVDEEKLEITRDIYLYYLPDDLKEIETKVVQVRLANLEPKDRDITFSDLARD
HLKKLTDADDELFMRGQVSLAVGNCVFVTTLEACQDLSSVSEMVVKYNFKHELVRNHALI
NSEHLNKIEALCKKSGLNVTDSTFDDIKAKDLPLKNPQNVSWAHLDSEEMNSVFFASAIN
PGNFFVRLEKFESCMISLLEDIKAHVENNTEKICDIKEGDIVLAEFPDDSTYERARIDNV
NGNRVKCFFVDQGDWREIDIKSLVQIPDRFLKKLPFQAIECRLVGVKPLGEEWTDFSTNW
FHDNCFEGSSENLKYLFVKYFTKEPAKYTGGNKYGVVLIDTNTEQDVIINELMIDLNLAR
QHEEELKHFDNIYTELKKDTHKLQTDKEENCENTASETKVVSNSSIPQPIRSVPLINSDE
ESDDSDKWEVHISADNAAALFGTVANKCAITNSDSAKTPQTSYEMISPCERSKAITQELD
SDDLTSPELSEISKTPVKRNVVKELDQKRHPKIMWHQNKSTIYVKIHLVVDNYDLLIDDR
KLEFLALTNDIKYGFDLELFGVVKTENSTHVNKGQYVLVKLAKVLNKSWLTLTRNGDTKW
VVYDVDFIDTSSDEEVVDRSSVMNIVISLNDNADTDTDDEQFCDDANFTYKK