MonarchBase - Protein-coding gene

DPOGS213860
Transcript	DPOGS213860-TA	5199 bp
Protein	DPOGS213860-PA	1732 aa
Genomic position	DPSCF300361 + 125362-131205
RNAseq coverage	164x (Rank: top 51%)

Annotation
*Heliconius*	HMEL010309	0.0	48.45%
*Bombyx*	BGIBMGA009774-TA	0.0	52.35%
*Drosophila*	CG31755-PB	5e-32	23.07%
EBI UniRef50	UniRef50_Q1XG89	6e-146	56.01%	RNA helicase-like protein n=1 Tax=Bombyx mori RepID=RNAHL_BOMMO
NCBI RefSeq	NP_001037005.1	1e-146	56.01%	RNA helicase-like protein [Bombyx mori]
NCBI nr blastp	gi\|112983270	2e-145	56.01%	RNA helicase-like protein [Bombyx mori]
NCBI nr blastx	gi\|112983270	8e-147	47.23%	RNA helicase-like protein [Bombyx mori]

Group
Gene Ontology	GO:0005524	5.2e-14	ATP binding
	GO:0008026	5.2e-14	ATP-dependent helicase activity
	GO:0003676	5.2e-14	nucleic acid binding
KEGG pathway	ani:AN1266.2	6e-12
	K12811 (DDX46, PRP5)	maps->	Spliceosome
InterPro domain	[1249-1364] IPR008191	1.7e-17	Maternal tudor protein
	[1587-1727] IPR008978	2e-14	HSP20-like chaperone
	[562-709] IPR011545	5.2e-14	DNA/RNA helicase, DEAD/DEAH box type, N-terminal
	[1294-1351] IPR002999	3.8e-08	Tudor domain
Orthology group	MCL17713		Patchy

Nucleotide sequence:

>DPOGS213860-TA
ATGCCAACGGATTGTTATAGAGTAGATGTGATCCATTATTTAAATCCGTCTTTAATATGGGTGGAAGTATGTGATTCCCTAGTGAGTGTAGATGAATTTGTTTTTGAACAAATCGGCATTTACGGTATTGTACCCCATGAAACTACTATTGATATAGAACTTGAAAGTATTGTCTCAGCTCAATGTACTGATTGGGTTTCTGCGGCGAATACAATTTTAAAAAATCTTTTGTGTAAGTCCGAAGAAGTATGGTTTCTACCAACGTACATAGATAGAAGATCTTCCATATTTGATGACAACATACACAAGTATGGAGAATTAATACTCAAAAATAGTGATGGAAAACTGAAGAAGGTTTCAAAATATTTAGTTAAATCTGGTTTTGCTGAAATGAATGTTTCGAAATTTCACAGTCAACTCAACAACGGTGAATTAAACACTAAACTGGAGTTCATACAAACACAAGAAGTTATAAAACAATTAGAGAAGCATTACACAAAGTCATCTAAAAAGAAAGAGTGGGAGAAATTTGTGAGAAAACAGACATCGGTATTCCAAATGAAACAGAAATTTGAATCCGAGTTAACAGTATCAAATCTAGAAAAACATAATAATATAATGATAAAGAGAGTCATAGAAAATAAGAGTAACGATTTTGAACTTTGTAAAGATGTTAACGAGAAACCATTAGGTCGAGGCTTCCATAAAGCTGATTCTATTAAGAGTGAGTTAAAATCAAAATTATTAAAAAAGAAGACGTCATATCACGATAAAACATCATTCGATGATATTAAACGTTTCCTCGACAAAAATTCAAGATCGAAGGATGAGGATACAGAATCAAGTGAGCCAGATCACAATCAGAATGGTTTGAGATTTTTAAGCGGAAGGCTGGGAAAGACGCATAATACAGAACAGAAGGTTCTGGCACACGACAGAGCCAGGATACAAATGGCTGCAAAAGCTTGTGACGATTCATATCAATATGATGACCATGGAAAATCGATACAAAAAAGATTTACAAAAATCAAAGGAGATAAAAAAAATTCAGAAAAACTTGTAGCATTTGGACCTCCAGATCTGGATCCTTTTAAGATGAAGGTTGAGAAATTACCTGCTATTGATCATAAAGGTGCTGATCAAGAACTTTTAAAAGAAGATTGTATAGACAAAGAAGATTTTGATAAAATTGATTCTGATATGTCCAAACACATTTGTGATAATTTGGTTCATATTGATGCTAGAGCCAGTGACAGTGATCAAACAGTACTGAGTTCAGTATTACAACGTCGTTTGAAAGCTCGCGTCAGTGTTAGGAATAATGAAAGCAGTATATCAAGCTCAGATACGAATACAGAATCGTCTAGTGCGGGCGAAAACAAGGAATCCTTTGACGACGATGAAGTTTTGGAAATTATCGGTAAAAGGTACACACAATGCCCATCACTAAAAGTCGATAATGTTAGTGATTCCGTCGATATAAGTTTGAAAAATAACGTGAATCCATTCAAGAATGTCGATTCCGGCTTATCCGTGTTTGTCGATAAATTAGTGACACCCGTTTTAATGGTTCATTCGAAAAGCAATAAGCGCATCGAACCCGTCTTCCAGATGAGAGACATACATTTTAATGACCACATACGACTCGTCCTAAGAAACATGAACGTCGAGAAGCTCATGATGGTGCAGACAGTATCTTGGAATGCGATTTTGAGGGGTTTCAGTGTGTTCATGGTCAATCCCATGGGTAGTGGCAAGACTATGGGTTATTTGCCTGCCGTTTGTCGGCTAGTTAGTGACGGTGGTGGCGATATATCGACTAGTTCAGGCCCTATGTGTATTATAGTCTGCGCTACGGCGAAATCTGTGGTAGAGGTCGAGAGATTGGCTAAAATGTTCCTTGGCTTGGATGAAAGAGTCGTGGCATGCTATGCGGGCGTCGATGATGCGTATATAACAACAGCTTTATTGAATGGATGTGATTTATTCATTAGTACCCCGCCGGCTTTAGCTCGATTGTTAAGGGTAAACGATTTTGGTATCGATTTGAGACGCCTCTCGATGTACGTTCTAGACGATTGTGAGCGATTAACGCAAACCTACAACGATGAACTGAAATTCTTTCAAATTAAAATCAACTCGATGCTGAAATATCGAGTTAATAAAGAGTTAAAAGTGCAATATATTATTGCGTCACGCTGCTGGTGTGACTTCATGGCACCGTTGGCAAAAAAAGCACCTGACACGATAATTTGTATCGGAGCATTCCAAGAATGTGTTATTTATTCAAAGGCGAATACATCGGTCAGCTTTATTAATAGTGAAAAAAAATTGGAGCATGTCTTCGAATTCTTGGAAACCATAGACGCTTCAAAGAGAACTGTCATAGTTTGTGCCGATAACGATGAAGTGGAAGTGTTGCAAACAGCTTTGAGAAATACAAAACGCATTGTTTTTGCTTGTGATAACAATATGACCGTTCATGATTTGTACAGTTTAAGCGAGTCGTGGGCAGATTACCAAGAACCTGTTTCAGGACCTATCCTTGTGTGTTGTGATGGCAACTTGACCCATATGAATATAACAGACGCTCACCATCTTATACATTACTCGATGCCGCAATATTTTTCTACGTTTTGCAAGCGTTTCTCTGTTTTAAATGACAACTATCCGTCGATTTTCAAAGCGATTAATGATAATGTTAAAATTAAAATACTTTTAGAGGAGAGTAACGCGCAACAGCTGCCAAAAATCGTTAATTTTATCAGACGGTGCACAGAAAACCTCCCAACGTTCTTAAATGATGTTTGTGCCACTATTAATACTAACAAAGATTTGATGAAAGCTCAAAAATTGGTTCCACTTTGCGATAACTTACTTCAACTGGGCGATTGTCCAGATTTCTATAACTGCCACGAAAGGCATACAATATTGAAAGATGCAGATACGCCCAAAGAGTGGGTGCCGAGAAACGGTGTAATAACCTTCAAAATAATACATTATCATACAGCAACCTTATACTCAGCCAGACTTTTAACTGTGACTGTTAATGGCACGACTTCTAAGTTTCCTCAAACATACAGTACGCTTTCATTAAAAATGGGTATGTATTTTGCCAACGAAACTCATAGAAAATTGCACGGTATGCCAGAAATTGGTGATATTTGTGCTGTAGCTATGAAAGTTAATTTCTACGCGAGATGTCAAGTACTTAAAATATTGTCTCGGTATCAGAGAGGCAATCCGAACAAGGTACTGGTAAGGCTTGTTGACGAAGAAAAGCTTGAAATAACGAGAGACATATATCTTTACTATTTGCCGGACGATTTGAAAGAGATAGAAACGAAAGTTGTTCAAGTAAGACTTGCTAATTTAGAACCCAAAGACAGGGATATAACTTTCTCTGATCTTGCCCGAGATCACTTGAAGAAATTAACGGATGCTGATGATGAGTTGTTTATGAGAGGTCAAGTGTCACTGGCGGTCGGAAATTGTGTTTTTGTGACCACTCTTGAGGCTTGCCAAGATTTGTCATCTGTGAGCGAAATGGTCGTGAAGTACAATTTTAAGCATGAACTTGTAAGGAATCATGCTCTTATAAATTCTGAACATTTAAACAAAATTGAAGCCCTTTGCAAAAAAAGCGGATTGAATGTTACGGATAGTACATTTGATGATATAAAAGCTAAAGACCTTCCGTTGAAAAATCCCCAAAATGTTTCCTGGGCTCATTTAGACAGCGAAGAAATGAACTCTGTGTTTTTTGCTTCCGCCATAAATCCAGGAAACTTCTTTGTACGTTTGGAAAAATTCGAATCCTGCATGATTAGTCTGTTAGAAGATATAAAGGCTCACGTTGAAAATAACACAGAAAAAATCTGTGATATAAAAGAAGGTGATATAGTTTTGGCTGAGTTCCCCGACGATTCTACATACGAGAGAGCTAGAATTGATAACGTAAACGGAAACAGAGTAAAATGCTTCTTCGTGGACCAAGGCGATTGGAGGGAGATCGATATAAAAAGCCTTGTTCAAATACCAGATAGATTCTTAAAGAAATTACCGTTTCAGGCTATCGAATGTCGATTGGTCGGTGTAAAACCATTAGGCGAAGAATGGACCGACTTCAGTACGAACTGGTTTCATGATAATTGCTTTGAAGGTAGCAGTGAAAATTTAAAATATTTATTTGTTAAGTATTTCACGAAAGAACCAGCGAAATACACTGGCGGTAACAAATATGGCGTGGTCTTAATAGACACTAACACGGAACAAGACGTCATTATAAACGAACTAATGATTGATCTAAATCTAGCTCGACAACACGAAGAGGAATTAAAGCATTTTGACAATATTTACACAGAGTTAAAGAAAGATACACATAAGTTGCAGACTGATAAAGAAGAGAATTGTGAAAATACAGCGAGTGAGACTAAGGTTGTGAGTAACTCTAGCATTCCACAGCCTATACGTTCAGTACCTTTAATAAATTCGGATGAAGAATCCGATGATTCAGATAAATGGGAAGTTCACATCAGCGCTGATAACGCTGCGGCATTGTTTGGGACGGTGGCAAATAAATGTGCGATCACTAATTCCGATAGTGCAAAAACACCACAAACATCTTACGAAATGATTTCTCCGTGTGAAAGAAGCAAAGCTATTACACAGGAATTAGACTCGGATGACTTAACGTCGCCGGAGCTATCTGAAATATCGAAGACGCCAGTCAAACGGAACGTTGTTAAGGAATTAGATCAAAAACGACATCCAAAGATAATGTGGCATCAAAATAAAAGCACAATATACGTTAAAATACATTTAGTTGTCGACAATTACGATTTACTCATCGACGACAGAAAATTAGAATTCCTCGCTTTAACAAACGACATAAAATACGGATTCGACTTAGAACTGTTTGGTGTTGTTAAAACTGAGAATTCTACGCACGTCAACAAAGGACAGTATGTGTTAGTTAAACTAGCGAAAGTTCTGAACAAGAGCTGGCTAACGCTCACTCGGAACGGCGACACGAAGTGGGTAGTTTACGACGTGGACTTCATTGACACGTCGTCAGACGAAGAAGTTGTTGACAGAAGCTCGGTTATGAATATTGTTATAAGTTTAAACGACAACGCGGACACGGATACTGACGACGAGCAATTCTGTGATGATGCGAATTTTACATACAAAAAATAG

Protein sequence:

>DPOGS213860-PA
MPTDCYRVDVIHYLNPSLIWVEVCDSLVSVDEFVFEQIGIYGIVPHETTIDIELESIVSAQCTDWVSAANTILKNLLCKSEEVWFLPTYIDRRSSIFDDNIHKYGELILKNSDGKLKKVSKYLVKSGFAEMNVSKFHSQLNNGELNTKLEFIQTQEVIKQLEKHYTKSSKKKEWEKFVRKQTSVFQMKQKFESELTVSNLEKHNNIMIKRVIENKSNDFELCKDVNEKPLGRGFHKADSIKSELKSKLLKKKTSYHDKTSFDDIKRFLDKNSRSKDEDTESSEPDHNQNGLRFLSGRLGKTHNTEQKVLAHDRARIQMAAKACDDSYQYDDHGKSIQKRFTKIKGDKKNSEKLVAFGPPDLDPFKMKVEKLPAIDHKGADQELLKEDCIDKEDFDKIDSDMSKHICDNLVHIDARASDSDQTVLSSVLQRRLKARVSVRNNESSISSSDTNTESSSAGENKESFDDDEVLEIIGKRYTQCPSLKVDNVSDSVDISLKNNVNPFKNVDSGLSVFVDKLVTPVLMVHSKSNKRIEPVFQMRDIHFNDHIRLVLRNMNVEKLMMVQTVSWNAILRGFSVFMVNPMGSGKTMGYLPAVCRLVSDGGGDISTSSGPMCIIVCATAKSVVEVERLAKMFLGLDERVVACYAGVDDAYITTALLNGCDLFISTPPALARLLRVNDFGIDLRRLSMYVLDDCERLTQTYNDELKFFQIKINSMLKYRVNKELKVQYIIASRCWCDFMAPLAKKAPDTIICIGAFQECVIYSKANTSVSFINSEKKLEHVFEFLETIDASKRTVIVCADNDEVEVLQTALRNTKRIVFACDNNMTVHDLYSLSESWADYQEPVSGPILVCCDGNLTHMNITDAHHLIHYSMPQYFSTFCKRFSVLNDNYPSIFKAINDNVKIKILLEESNAQQLPKIVNFIRRCTENLPTFLNDVCATINTNKDLMKAQKLVPLCDNLLQLGDCPDFYNCHERHTILKDADTPKEWVPRNGVITFKIIHYHTATLYSARLLTVTVNGTTSKFPQTYSTLSLKMGMYFANETHRKLHGMPEIGDICAVAMKVNFYARCQVLKILSRYQRGNPNKVLVRLVDEEKLEITRDIYLYYLPDDLKEIETKVVQVRLANLEPKDRDITFSDLARDHLKKLTDADDELFMRGQVSLAVGNCVFVTTLEACQDLSSVSEMVVKYNFKHELVRNHALINSEHLNKIEALCKKSGLNVTDSTFDDIKAKDLPLKNPQNVSWAHLDSEEMNSVFFASAINPGNFFVRLEKFESCMISLLEDIKAHVENNTEKICDIKEGDIVLAEFPDDSTYERARIDNVNGNRVKCFFVDQGDWREIDIKSLVQIPDRFLKKLPFQAIECRLVGVKPLGEEWTDFSTNWFHDNCFEGSSENLKYLFVKYFTKEPAKYTGGNKYGVVLIDTNTEQDVIINELMIDLNLARQHEEELKHFDNIYTELKKDTHKLQTDKEENCENTASETKVVSNSSIPQPIRSVPLINSDEESDDSDKWEVHISADNAAALFGTVANKCAITNSDSAKTPQTSYEMISPCERSKAITQELDSDDLTSPELSEISKTPVKRNVVKELDQKRHPKIMWHQNKSTIYVKIHLVVDNYDLLIDDRKLEFLALTNDIKYGFDLELFGVVKTENSTHVNKGQYVLVKLAKVLNKSWLTLTRNGDTKWVVYDVDFIDTSSDEEVVDRSSVMNIVISLNDNADTDTDDEQFCDDANFTYKK-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: