| New model in OGS2.0 | DPOGS210241 |
|---|---|
| Genomic Position | scaffold457:+ 846-8305 |
| See gene structure | |
| CDS Length | 1782 |
| Paired RNAseq reads | 3149 |
| Single RNAseq reads | 8187 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002375 (0.0) |
| Best Drosophila hit | short wing, isoform K (2e-179) |
| Best Human hit | cytoplasmic dynein 1 intermediate chain 1 isoform c (6e-154) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC011326 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011326 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005868 cytoplasmic dynein complex GO:0003777 microtubule motor activity GO:0001754 eye photoreceptor cell differentiation GO:0016482 cytoplasmic transport GO:0007291 sperm individualization GO:0007051 spindle organization GO:0051642 centrosome localization GO:0045503 dynein light chain binding GO:0005875 microtubule associated complex GO:0000226 microtubule cytoskeleton organization GO:0008088 axon cargo transport |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL10559 |
Nucleotide sequence:
ATGGAGGACTGGTGGCGGCCGCGGAAAGCGCACGCCACTGACTTCTACGACGAGTACAAT
CTAAACCCGGGTTTAGAGTGGGAGGACGAGTTCACAGTGCTTACATTCGACGGTGATGGC
GCGCGGCAAGGAGACGACGAGGACGCCTTCCACGGGAAGTTACCGCCGGGGATCCTGCCG
CACGGACTGCCCACCGTCAAGGAGGTGCAGCCGGCCGTCACCGCCGCGCCCGCCGAAAAG
AAGGACGAAGAAAAGGAGAAGAAAGTTCGCGAGCTGAGCAACGACGAGAAGCAGACCATC
ATGCTGTCGGCGGAGTTCCAGAAGTTCATAAGCAGAGCGGGGCGGGTCATAGAACGAGCG
CTGGCCGAGGAGGTCGACATCTACACGGACTACACCGGCGGCGGCGACGGAGAAAACGCG
CAAGACGACAAGTCGGACGCGCGCTTGTCGCTGGTGCGCACGTTCCAGGACGAGCGCTGG
TCCCGCGGGCGCTGCGTCACGTGCCTGGACTGGTCGACGGCGCACCCCGAGCTCATGCTG
GCGTCCTATCACAACAGCGACGACGCGCCGCACGACCCCGACGGCGTGTGCCTCGTGTGG
AACACCAAGTTCAAGAAGACCACGCCGGAGGACATCTTCCACTGCCAGTCGCCCGTCATG
AGCGCCACCTTCGCCAGGTTCCACCCTAACCTGATCCTGGGCGGCACGTACTCGGGCCAG
ATCGTGTTGTGGGACAACAGAGTACAGAAACGAACGCCCGTGCAGAGGACGCCGCTCTCG
TCACAGGCGCATACTCACCCCGTGTACTGCCTGTCCGTGGTGGGCAGTCAGAACGCGCAC
AACCTGATCTCGGTGTCGACGGACGGGCGCATGTGCTCGTGGTCGCTGGACATGCTGTCG
CAGCCGCAGGAGACCATCGAGCTGCAGCACCGCCAGGGCAAGGCCGTGGCCGTCACCGCC
ATGGCCTTCCCACACGGGGACGTCAACAACTTTGTGCTCGGCAGCGAGGACGGAAATATT
TACACCGGTTGCCGTCACGGTCAGCGAGCGGGCGTGTCGGACAGCGTGGAAGGTCACGCG
GGTCCTGTGACGTCGGTGTCGTGTCACGCCGCCCCCGCCGCCCTCGACCTGTCGCACCTG
TACCTCTCCGCCTCTGTGGACTGGAGCGTCAAGCTGTGGAGTCTGAAGGAGAACAAGGCG
TTGTACTCGTTCGAGGACAGCGGCGACTACGTGTCGGACGTGCGCTGGTCCCCGGCTCAC
CCCGCGCTGTTCGCTGCCGTGGACGCGGGCGGCCGCCTCGACCTCTGGAACCTCAACAGG
GACACCGAGGTGCCGATAGCGTCGGTGATGTCGGAGGGCGGCGTGGCCTTCAACCGCGTG
TCGTGGAGTCCGAGCGGCGCACACGTCACGGCCGGGGACGACGCGGGCAAGATATGGGTC
TACGAGCTGGCCGAGAACGTAGCCCAGCCGCGGCATGATGAGTGGAGCAAGTTCGTGTAC
ACGTTGCAAGAACTGAGGAACAACCAGGCGGACGAGGAAACGGATCGCCTCAGCCTGGCC
AGCGGACCACCGTCGCTCTCCAGCCTCACCTCGCTGGCCAGCAACCCGCTCAGATGTAAT
CTGAAGTCTGATAAGAAAGATGAGGAATGTAATGCTGAGTCGAGTTTGCCCGCTGTGAAT
CGAATTAACATAAACCGTATAAGGTCGGCAGATTATCCATACAAATTATTCAGTACAGCG
TGTTATAATATTGCTGTTTCCTATCCAAGTAGATGTAGATAA
Protein sequence:
MEDWWRPRKAHATDFYDEYNLNPGLEWEDEFTVLTFDGDGARQGDDEDAFHGKLPPGILP
HGLPTVKEVQPAVTAAPAEKKDEEKEKKVRELSNDEKQTIMLSAEFQKFISRAGRVIERA
LAEEVDIYTDYTGGGDGENAQDDKSDARLSLVRTFQDERWSRGRCVTCLDWSTAHPELML
ASYHNSDDAPHDPDGVCLVWNTKFKKTTPEDIFHCQSPVMSATFARFHPNLILGGTYSGQ
IVLWDNRVQKRTPVQRTPLSSQAHTHPVYCLSVVGSQNAHNLISVSTDGRMCSWSLDMLS
QPQETIELQHRQGKAVAVTAMAFPHGDVNNFVLGSEDGNIYTGCRHGQRAGVSDSVEGHA
GPVTSVSCHAAPAALDLSHLYLSASVDWSVKLWSLKENKALYSFEDSGDYVSDVRWSPAH
PALFAAVDAGGRLDLWNLNRDTEVPIASVMSEGGVAFNRVSWSPSGAHVTAGDDAGKIWV
YELAENVAQPRHDEWSKFVYTLQELRNNQADEETDRLSLASGPPSLSSLTSLASNPLRCN
LKSDKKDEECNAESSLPAVNRININRIRSADYPYKLFSTACYNIAVSYPSRCR