| Genomic Position | scaffold7:+ 60398-65872 |
|---|---|
| See gene structure | |
| CDS Length | 2445 |
| Paired RNAseq reads | 229 |
| Single RNAseq reads | 674 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (7e-64) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10254 |
Nucleotide sequence:
ATGGAACCCTGGAGAAGGACATTTCCCGATCCCGATTTCGATCTTGAAAAGTGGCGGGAC
ACCTATTTAAAGCAGAGCCCTAGCAAGTCCGAGTTACCCACGTCCCTGTTGGCCCTCCTG
GGAACTGCTGCAACCGCGCAGACGCGTGACCGCTACCATAGGATGCAAACGCTCACAGGC
TCTAAGGTGGCAGCCCCACCATACACTTGGAATTCACCCGATGGAGTCACCAAGAATCAA
ATCGACCACATTGCCATCAGCGCCAAATGGTGCTCATCAGTGCTTGATATCCGCAACCGT
CGTGGCGCGGATATCGATAGTGATCACAACCTTCTAGTTGCCAAGGTACAACTCAAAGTA
GCTGTAGCTCGGCCCAGAAACACCACTATCAAGGTTGAGAAACTGTTTGAGATCAACAAA
CTGCAGGACCCAGTCGTAGGTGAGGCCTTTAGGACCAGCTCCGTCGTTCTTGGTTACAAA
CGCCATAGACGCGAGGACTGGATGTCACAGAGAACTTGGAATCTCATTGAGGAGAGGCGC
AAGTCTCACCTTCAAATTCTGGCAACCATCGATGAGGCAGTGCGCGAAGACCTGAAGCTG
CAATATAGGCGTATACGCAAATGCATATACCGCAGTGCTCGCCACGACCGGCGAGTGCGG
GCGGAAAATGTGGCGGATTGCGCCCAACGCGCTGCCAACTCCGGTAATCTCAGGGAGATG
TACAAGGCGACGAGGATCTTGACCGGAAAACGGGCCTTGAAGAAGAAGCCCCTGAAGGAC
AAAAGGGGCGAACTGATTGTTACATCGGAGGGACAGCTCCATCGTTGGCGTGAACATTTT
GTGGAAATCTTCCAAGTACCAAATAGCCCCATAACACCAACTACAGCTGCCAACCTGCAA
GCAGTAAGCCACGATATCGACGAGTCTCTCCCCACTGAAGAGGAAGTAGTGAAAGCCATC
CAGTCGCTTAAGAACGGTAAAGCTCCTGGACACGACCTCATCACGGCGGAAATGCTAAAA
GCAGATATACCTACCGCTGCGAACGCGCTAACACCTCTTCTGCGGAACATTTGGTCAGCC
GAGGAGTTACCGGATGACTGGACTAAAGGGCTTCTCATCACTGTGCCAAAGAAGGGAGAT
CTCAGTGAATGCGCCAACTGGAGAGGGATTACCTTGCTTTCTACTCCGTCTAAAGTGCTG
TGCAAGATTATCCTAGACAGACTATCGAGGGCCATTGAACCTCTTCTTCGCAGAGAACAG
GCTGGATTCCGACCCAACAGATCGTGCACCGACCAGATTATTACCTTACGCATAATCCTC
GAACAAGCATCAGAATGGCAGAGGGAAATGTATTTGACCTTTGTGGATTTCGAAAAAGCT
TTCGACACGCTGAGATGGACAGGTATCTGGGAACGTTTACGTGAAGTTGGAGTCCCCGAC
AAAATAATCAACCTGATAAAAGCCCTCTACAGGAAATATTCCTGTAAAGTAATTCACAAC
GGTCTTTTGTCGGAGGACATACCAGTCAATGCAGGTGTTCGCCAGGGGTGTCTCCTTTCT
CCTATTCTCTTCCTTGTCGTTCTGGATGGTATCATGCAGAAAGTGACGAAAAGCAAGCGC
CGCGGCATAGAATGGGGACTGTCCAGCACTTTGGAAGATTTGGACTATGCCGATGACCTA
TGCCTGCTGAGCCATACACACGCCAACATGCAAACCAAACTGGACGACCTACGACGAGAA
GCATTAGAGATGGGGCTAAAAATAAACACGCGAAAGACCCAGGAGATGAGGTGCGGAGCA
ACAACCTCTCTGCCGTTGCTCATTGGCACAGAGGCTATAGAAAAAATCCACAAATACACC
TACCTAGGAAGCATAGTATCGGAGAGTGGAGGTGCCGAAGAGGACATCGCTTCGAGAATC
GCCAAATCAAGAGCAGCCTTCGCGCAACTCCGTCCTGTATGGCAGTCGCGGAAACTAACC
AGGAGAGTTAAACTCAAAATATTCCGGTCCAACGTCAAATCCGTGCTGTTATACGGATGT
GAGACGTGGAAGGTTACTAAGGACATCTCGCATCGGCTTCAGGTCTTCGTCAATTGGTGT
CTTCGCCGTATTCTCGGTATTTACTGGCCCGAGAAAATTTCCAACGTTAATCTCTGGGAA
CGCTGCGGTGAGACACCGATTGACCTGCAAATCAAACGTCGCAAGTGGAAGTGGAAGTGG
AAGTGGGTCGGCCACACTCTTTGCAGGTATCCGGAACACATACCGAGACAAGCCCTAGAC
TGGACCCCTGAAGGAAAGCGAAAACGTGGCCGCCCTAGGCAGACCTGGCGGCGCACGATC
ACTGCAGAGGTCAAAAACATCGACAAGACTTGGAGCGACATGAAAGGCGAAGCTCAAGAC
CGAACGAGATGGCGACGTACTGGGGACGCCCTCTGCCCCATCTAG
Protein sequence:
MEPWRRTFPDPDFDLEKWRDTYLKQSPSKSELPTSLLALLGTAATAQTRDRYHRMQTLTG
SKVAAPPYTWNSPDGVTKNQIDHIAISAKWCSSVLDIRNRRGADIDSDHNLLVAKVQLKV
AVARPRNTTIKVEKLFEINKLQDPVVGEAFRTSSVVLGYKRHRREDWMSQRTWNLIEERR
KSHLQILATIDEAVREDLKLQYRRIRKCIYRSARHDRRVRAENVADCAQRAANSGNLREM
YKATRILTGKRALKKKPLKDKRGELIVTSEGQLHRWREHFVEIFQVPNSPITPTTAANLQ
AVSHDIDESLPTEEEVVKAIQSLKNGKAPGHDLITAEMLKADIPTAANALTPLLRNIWSA
EELPDDWTKGLLITVPKKGDLSECANWRGITLLSTPSKVLCKIILDRLSRAIEPLLRREQ
AGFRPNRSCTDQIITLRIILEQASEWQREMYLTFVDFEKAFDTLRWTGIWERLREVGVPD
KIINLIKALYRKYSCKVIHNGLLSEDIPVNAGVRQGCLLSPILFLVVLDGIMQKVTKSKR
RGIEWGLSSTLEDLDYADDLCLLSHTHANMQTKLDDLRREALEMGLKINTRKTQEMRCGA
TTSLPLLIGTEAIEKIHKYTYLGSIVSESGGAEEDIASRIAKSRAAFAQLRPVWQSRKLT
RRVKLKIFRSNVKSVLLYGCETWKVTKDISHRLQVFVNWCLRRILGIYWPEKISNVNLWE
RCGETPIDLQIKRRKWKWKWKWVGHTLCRYPEHIPRQALDWTPEGKRKRGRPRQTWRRTI
TAEVKNIDKTWSDMKGEAQDRTRWRRTGDALCPI