| New model in OGS2.0 | DPOGS206861 |
|---|---|
| Genomic Position | scaffold1:- 2389839-2401584 |
| See gene structure | |
| CDS Length | 1002 |
| Paired RNAseq reads | 651 |
| Single RNAseq reads | 1628 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013823 (3e-07) |
| Best Drosophila hit | Sex lethal, isoform S (2e-73) |
| Best Human hit | ELAV-like protein 4 isoform 5 (4e-46) |
| Best NR hit (blastp) | sex-lethal [Bombyx mori] (7e-154) |
| Best NR hit (blastx) | sex-lethal [Bombyx mori] (2e-157) |
| GeneOntology terms | GO:0007549 dosage compensation GO:0019099 female germ-line sex determination GO:0048024 regulation of nuclear mRNA splicing, via spliceosome GO:0019101 female somatic sex determination GO:0005515 protein binding GO:0048025 negative regulation of nuclear mRNA splicing, via spliceosome GO:0008187 poly-pyrimidine tract binding GO:0007541 sex determination, primary response to X:A ratio GO:0030237 female sex determination GO:0018993 somatic sex determination GO:0048477 oogenesis GO:0007131 reciprocal meiotic recombination GO:0003729 mRNA binding GO:0007530 sex determination GO:0008266 poly(U) RNA binding GO:0007281 germ cell development GO:0007548 sex differentiation GO:0017148 negative regulation of translation GO:0000900 translation repressor activity, nucleic acid binding GO:0048027 mRNA 5'-UTR binding GO:0000380 alternative nuclear mRNA splicing, via spliceosome GO:0000166 nucleotide binding GO:0000398 nuclear mRNA splicing, via spliceosome GO:0003730 mRNA 3'-UTR binding GO:0008083 growth factor activity GO:0007446 imaginal disc growth GO:0007224 smoothened signaling pathway GO:0009994 oocyte differentiation GO:0043234 protein complex |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR002343 Paraneoplastic encephalomyelitis antigen IPR000504 RNA recognition motif domain |
| Orthology group | MCL16727 |
Nucleotide sequence:
ATGTGCGAGCGGTACCCAGGATATCTCTTCGGAGGGACTCCGGTCAGCAGCTGGGACAGA
AGTTTTAATTCACTAGAAAATCAAATCCAGCAGCAGTATCGAGGGCGTGTAGGTGCGGGT
GTCCGTTGCTGGGGCAGTATGTCAGAGGGCGGGATATCCTCTGCGGGTGACGCGGGTAAG
ACCAACCTGATCGTCAACTACCTGCCGCAGACTATGACGGAGAAGGATCTCTATGCGATG
TTCATGTCCATAGGACCCATAGAGAGCTGCAGGGTTATGAAGGATTTTAAGACTGGTTAT
AGCTATGGGTTTGGTTTCGTCAACTTCACAAGAGAGGAAGACGCGGCACGAGCGATCGAA
ACATTCAATGGATATCAATTGAGGAATAAGAGACTGAAGGTGTCCTACGCTCGTCCTTCC
GGTGAGGATATAAAAGAGACCAACTTGTACGTAACGAATCTGCCGCGTGCTATAACCGAG
GACCAGTTGGAGACGATATTCGGGAAGTACGGCAGAATTGTACAGAAACATATACTGAGA
GACAAGAGCAACGGCACTCCGAGAGGTGTCGCTTTTGTGCGGTTCGACAAACGTGAGGAG
GCTCAGGAGGCTATCGCGGCGCTAAACAACGTTATTCCCGAGGGTGGTTCCGAGCCGCTG
TGTGTTAAGGTTGCTGAAGAACACGGGAAGCAGAAGGCCGCGTACTACGCCGGTTGGGCC
GCTGGCTTTCATCACAACAGGGGGGACTTTTCCTGGAACTGTGGGAACTGCATGATGCCG
GATGCCTGGGAAAGGTTCCCGTCCCCACCATTGGGAGGCAGTCATCCAAATACTCCCAGA
AACGGATGTAGGCCGGGATCCTGCGCCAACACTAGGATATTCCCCAACTACCCAAAAAAC
TCACCCAGGAACAATAGGGGACGAAACTTCCCCTGGGGTCAGGGTGTTGAAGATAGGTTT
AAGGGACAGCGGTGTAGAAACGGTCAAGCGCCTTATTGGTAA
Protein sequence:
MCERYPGYLFGGTPVSSWDRSFNSLENQIQQQYRGRVGAGVRCWGSMSEGGISSAGDAGK
TNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIE
TFNGYQLRNKRLKVSYARPSGEDIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKHILR
DKSNGTPRGVAFVRFDKREEAQEAIAALNNVIPEGGSEPLCVKVAEEHGKQKAAYYAGWA
AGFHHNRGDFSWNCGNCMMPDAWERFPSPPLGGSHPNTPRNGCRPGSCANTRIFPNYPKN
SPRNNRGRNFPWGQGVEDRFKGQRCRNGQAPYW