| New model in OGS2.0 | DPOGS206884 |
|---|---|
| Genomic Position | scaffold1:- 1640522-1641112 |
| See gene structure | |
| CDS Length | 591 |
| Paired RNAseq reads | 18 |
| Single RNAseq reads | 77 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012841 (3e-76) |
| Best Drosophila hit | ND |
| Best Human hit | methyl-CpG-binding domain protein 4 (3e-17) |
| Best NR hit (blastp) | PREDICTED: methyl-CpG binding domain protein 4-like [Saccoglossus kowalevskii] (2e-21) |
| Best NR hit (blastx) | PREDICTED: methyl-CpG binding domain protein 4-like [Saccoglossus kowalevskii] (5e-22) |
| GeneOntology terms | GO:0008630 DNA damage response, signal transduction resulting in induction of apoptosis GO:0005737 cytoplasm GO:0006284 base-excision repair GO:0009314 response to radiation GO:0005634 nucleus GO:0005515 protein binding GO:0003824 catalytic activity GO:0003677 DNA binding GO:0000785 chromatin |
| InterPro families | IPR011257 DNA glycosylase |
| Orthology group | MCL20507 |
Nucleotide sequence:
ATGAATTTGGAGAACGACTTGAGTTTATCACAATTAACAATAGAAGAGCCGGACCCATTA
AACATACCGCCTTTCTTCAATCTCACACCTCGCTTAATGCCCGAATCACCTCACTATATA
ATAGAGGAGGAATTCTCTCTCAACCCCTGGGCAATGTTAGTAGCAACTATATTCCTAACA
AAGACGTCCGGCAAAACAGCTAGGCCGTATATAAAGAGTTTTTTTACGGACTACCCGACA
CCTTATCAAGTTTTGGATGAAACTCCATCGTCATTAGAGAGGTTCTTCGAGAACTTAGGA
TTAAAAAAACGTGGTAATATGATTTGGAAGCTGAGTTACCAGTTCGTGTCTGGTAAATGG
CGGCGAGCTAGCGATCTCTGTGGAATCGGGAAGTATGGGGAGGACGCTTATAGGATCTTT
TGCTTAGGTCACACGGATGTAAACCCTGACGATAGATATTTAAAGCTCTATTTAGATTGG
CTGCAGTGTCACACTGAGTTCATAAAAGACAGGAGCGTAACTGACAGCGAAAACCTATTA
CAAGATCCGGTTCTGAAATATTATAGAATTACTTTGAAAAGTAATGTATAA
Protein sequence:
MNLENDLSLSQLTIEEPDPLNIPPFFNLTPRLMPESPHYIIEEEFSLNPWAMLVATIFLT
KTSGKTARPYIKSFFTDYPTPYQVLDETPSSLERFFENLGLKKRGNMIWKLSYQFVSGKW
RRASDLCGIGKYGEDAYRIFCLGHTDVNPDDRYLKLYLDWLQCHTEFIKDRSVTDSENLL
QDPVLKYYRITLKSNV