| New model in OGS2.0 | DPOGS206918 |
|---|---|
| Genomic Position | scaffold1:- 1001495-1008360 |
| See gene structure | |
| CDS Length | 939 |
| Paired RNAseq reads | 735 |
| Single RNAseq reads | 2055 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013017 (2e-132) |
| Best Drosophila hit | CG2663, isoform B (5e-88) |
| Best Human hit | alpha-tocopherol transfer protein-like (5e-26) |
| Best NR hit (blastp) | cellular retinaldehyde-binding protein [Bombyx mori] (2e-146) |
| Best NR hit (blastx) | cellular retinaldehyde-binding protein [Bombyx mori] (7e-144) |
| GeneOntology terms | GO:0008431 vitamin E binding GO:0005215 transporter activity GO:0005622 intracellular GO:0006810 transport |
| InterPro families | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
| Orthology group | MCL40805 |
Nucleotide sequence:
ATGAAGTTGAAGTCAGAGTTACTGGTGCAACCTTCGGGGGAGTTGTCCAAGAAGATTAGG
GAAGAACTGAAAGAAGATCCTAAAACAAGAGATCGCGACCTCGCCGCTATCAAGGACTGG
CTCCGGAAACAACCTCATCTTCCTGATGAATGGGAGGACATGCCGCTCCTCACATTCCTC
AGGGGAAGTAGTTTCTCATTGGAGAAATGCAAACGTAAATTGGACATGTACTTCACTATG
AGAGCCGCTTGCCCAGAGTTCTTCACCAACCGCGACGCCACAAGCCCGGCCTTGAGGGAA
GTCCTGAAAACTAAGCTACAAGGACCAGCACTGCCTGGCGTAACGCCGAATGGCAGAAGA
GTGACAATTTGCAGAGGTCTTTATCCCAGTTTAGATTCACAGCAAATAACGGACACTCTG
AAGCTAGCTCTCATGATCGGAGACATCAGACTAATTGAAGAAGTGGAAGGCGTCGCTGGC
GACATTTATATTTTAGATGGAGCTGTTCTTGGTGCAAGTCTGCTAGGAAGATTATCTCCG
TCAGTAATCAAGAAGTTCATGATTTGTGTTCAAGAAGCATATCCAGTGAAACTAAAGGAA
GTGCATATAATCAACACTTCTCCTACCGTAGAGAGATTTGTGACGTTCGTGAAGCCGTTC
CTTAAGGAGAAGATACGGAAGAGAATCTTCATTCATAAAGATATCAAGGACTTATACAAG
TACGTCCCACAAGAAATGTTACCGAAAGAGTACGGCGGTCAGTGTGGTACCATGGACGAG
TTACAGCAAAACTGGACGGACAAGCTGATAGAGTACCGTGACTGGTTTAAAGCTCAAGAC
GCCCTGGTCGCTAACGAGAGCTTGAGACCAGGGCGCCCTACTAACTACGATGAATTATTC
GGAATCGACGGCTCGTTTAGACAACTGGCCATTGATTAA
Protein sequence:
MKLKSELLVQPSGELSKKIREELKEDPKTRDRDLAAIKDWLRKQPHLPDEWEDMPLLTFL
RGSSFSLEKCKRKLDMYFTMRAACPEFFTNRDATSPALREVLKTKLQGPALPGVTPNGRR
VTICRGLYPSLDSQQITDTLKLALMIGDIRLIEEVEGVAGDIYILDGAVLGASLLGRLSP
SVIKKFMICVQEAYPVKLKEVHIINTSPTVERFVTFVKPFLKEKIRKRIFIHKDIKDLYK
YVPQEMLPKEYGGQCGTMDELQQNWTDKLIEYRDWFKAQDALVANESLRPGRPTNYDELF
GIDGSFRQLAID