New model in OGS2.0 | DPOGS207009  |
---|---|
Genomic Position | scaffold1:+ 721834-722340 |
See gene structure | |
CDS Length | 507 |
Paired RNAseq reads   | 119 |
Single RNAseq reads   | 462 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012934 (6e-48) |
Best Drosophila hit   | Arc-p20 (3e-66) |
Best Human hit | actin-related protein 2/3 complex subunit 4 isoform a (3e-66) |
Best NR hit (blastp)   | actin related protein 2/3 complex subunit 4 [Bombyx mori] (5e-89) |
Best NR hit (blastx)   | actin related protein 2/3 complex subunit 4 [Bombyx mori] (1e-76) |
GeneOntology terms    | GO:0005515 protein binding GO:0005856 cytoskeleton GO:0005885 Arp2/3 protein complex GO:0030041 actin filament polymerization GO:0030674 protein binding, bridging |
InterPro families   | IPR008384 ARP23 complex 20kDa subunit |
Orthology group | MCL14712 |
Nucleotide sequence:
ATGTCGGCTACTCTAAAACCATATTTGACGGCGGTCCGCCACACTCTTACTTCCGCTATG
TGCCTAGAACACTTTTCGTCCCAGGTTGTAGAACGATACAATAAACCAGAAGTGGAAGTG
GGAACAAGCAAAGAATTGTTATTAAACCCAGTGATAATTTCACGCAATGTTAATGAGAAA
GTTTTGATTGAGTCATCCATTAATTCAATTAGGATAAGTATTATGATTAAACAAGCCGAT
GAGATTGAAAAGATTTTGTGTAAAAAATTCATGAGGTTCATGATGATGCGAGCGGAAAAC
TTTATCGTGCTTCGGCGGAAGCCGGTTGATGGTTACCATATCAGTTTCCTGATAACAAAT
TTCCACACTGAACAAATGTATAAACATAAATTGGTTGACTTTGTTATTTACTTCATGGAA
GAAATTGATAAAGAAATCAGTGAAATGAAATTAGCGGTCAATGCGCGTGCCAGAATTTGT
TCAGAAGAATTTTTGAAGAGATTTTGA
Protein sequence:
MSATLKPYLTAVRHTLTSAMCLEHFSSQVVERYNKPEVEVGTSKELLLNPVIISRNVNEK
VLIESSINSIRISIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN
FHTEQMYKHKLVDFVIYFMEEIDKEISEMKLAVNARARICSEEFLKRF