| New model in OGS2.0 | DPOGS207114 |
|---|---|
| Genomic Position | scaffold1:+ 2895221-2897035 |
| See gene structure | |
| CDS Length | 819 |
| Paired RNAseq reads | 26106 |
| Single RNAseq reads | 87108 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013076 (1e-84) |
| Best Drosophila hit | ribosomal protein L6, isoform B (1e-61) |
| Best Human hit | 60S ribosomal protein L6 (4e-50) |
| Best NR hit (blastp) | ribosomal protein L6e [Spodoptera exigua] (2e-115) |
| Best NR hit (blastx) | ribosomal protein L6e [Spodoptera exigua] (5e-103) |
| GeneOntology terms | GO:0022625 cytosolic large ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR000915 Ribosomal protein L6E IPR014722 Translation protein SH3-like, subgroup IPR005568 Ribosomal protein L6, N-terminal |
| Orthology group | MCL12487 |
Nucleotide sequence:
ATGGCTCCAGCTCAGCCCAAGGCGGTGGCTAAGGCTCCCGCTGCCCCAGCAGGCGGTGTT
CAGAAGGCCAAGGTTGGCAAACCAAGGAACTATGATTTGGGAAATGGAATCATGAGATTC
TCCAAGACCAAAATGTTTCACAAGAAGGCCAAGTACAAGTTCATCGGCAAGAAGCACCCT
AAAGCTGAGAAGCCCAAGAAACTAGCAGTGGTTGTTAAGCCTATTGGCGGAGACAAGAAT
GGAGGCACCCGTAGGGTTCTGATCAAGAAGAGGAGGTCATTCTACCCTACCCAGGATAAA
ATCACCACCCGTTCCCACCACAAGACATTTAGCAAGCACGTGCGTCGCACACGGCCAAAT
CTTACGCCTGGCACAGTGTGCATTCTGTTGGCTGGTAGACACGCCGGCAAACGCGTTGTA
CTGCTGTCGGTGATGCCCAGTGGACTCTTGCTTGTCACTGGACCTTTTGCTTTCAACTCC
TGCCCGCTTCGCCGCATTCCGCAGCGCTATGTCATCGGAACTAGCACCAAGGTGGACTTA
GGTGATTTCAAGCTCCCTGAACACCTTGACGACGCTTACTTCAAGAAGAACAAGAAGAGC
GTCAAGCGCAGTGTTAAGCGCAAGCAGGGCGAGGATATCTTCGCCACCAAGAAAGAGAAA
TATGCTCCATCAGAACAGCGCAAGGTTGACCAGAAGGCGGTTGACGAGGCTGTAATCAAG
GCTATCGGTGCACGTGCAGACAAGAAGTTGCTTCGAGGATACCTCAAGTCCTCATTTGGA
CTGCGTTCCAGCCAGTACCCTCACCGGCTACGGTTCTAG
Protein sequence:
MAPAQPKAVAKAPAAPAGGVQKAKVGKPRNYDLGNGIMRFSKTKMFHKKAKYKFIGKKHP
KAEKPKKLAVVVKPIGGDKNGGTRRVLIKKRRSFYPTQDKITTRSHHKTFSKHVRRTRPN
LTPGTVCILLAGRHAGKRVVLLSVMPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTKVDL
GDFKLPEHLDDAYFKKNKKSVKRSVKRKQGEDIFATKKEKYAPSEQRKVDQKAVDEAVIK
AIGARADKKLLRGYLKSSFGLRSSQYPHRLRF