| New model in OGS2.0 | DPOGS207115 |
|---|---|
| Genomic Position | scaffold1:+ 2910098-2914309 |
| See gene structure | |
| CDS Length | 1446 |
| Paired RNAseq reads | 813 |
| Single RNAseq reads | 2019 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013077 (0.0) |
| Best Drosophila hit | CG5745 (2e-147) |
| Best Human hit | TBC1 domain family member 22B (2e-117) |
| Best NR hit (blastp) | AGAP004522-PA [Anopheles gambiae str. PEST] (3e-168) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000011734 [Nasonia vitripennis] (8e-160) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005622 intracellular GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL11598 |
Nucleotide sequence:
ATGGAAAGTCACCAAGCCGAACATGACAAGAACGGATTGGTGGCTGAAACGTTCTGGAGG
ACTCCACAGAGAGCTGTCCCAGGCAGACCTTGTCAGAGGATTCAACAAAACAAGGTTATG
TCTGGTTCATCATATCAGCAGTTCCAGGCATCGGTGAACGATGCCTGGGACCTCGGCGAT
GACGACATCATCTCTGGCATAGCAGAGACTAAGATATCTAAAGCCATATCCCAAACAGCC
GCTATAAATGTTATAAATTCCCATCGGAAAAGTACTAAGAACGTAAACAATGACGTCAAA
GTTAATGAGGGGGTAAAGCCAATGGAGGAAGTTGTAGCTGTTAGGAAAAATGAAATTCGT
AAAATCGGTGGCGTCCCAGGTGGTAGTTCAGGGTTACGTCATTATCCTGGACGTCCAAGA
CCAGTGAAGTTGTCGGCGCTGACTTCAAGAGAAGAAAGCAGTGAATCTAAACTGGAAAGA
TTTCAGCAAGTTCTAGAGAGTGCTGTGTTGGATTTGAATGAGCTTAAACAGCTCAGTTGG
TCTGGAATTCCAACGAAGGCCAGAGCGGTAACATGGCGCCTGCTGGCTGGTTATCTACCA
GCCAACGCTGAGCGCCGCGCAGAGACTTTGGAACGTAAGAGGGCGGACTACAAGCACCTC
GTGCGGCAGTACTATGACGCTGACAGGGAGGAAGACACCTACAGACAGATTCATATAGAC
ATACCAAGGATGAGCCCCCTAGTGGCTCTGTTCCAACAGATAACAGTACAAGTGATGTTC
GAGCGCATCCTGTACATCTGGGCAATCAGGCATCCAGCATCAGGGTATGTGCAAGGTATC
AACGACCTGGTGACTCCATTCTTCATGGTATTCTTGCAAGAAGCTGCTCCTGGGAAGGAG
CTAGATAACTTCCCCCTGGACTCCCTGACCGAGGAACAACGCAACATCATTGAAGCTGAC
TCCTTCTGGTGCCTGTCCAAGTTTCTCGACAGTATACAGGATAATTACATCTTTGCTCAA
CTCGGGATCCAATACAAGGTGAATCAGCTCAAGGAGCTGATCCGCCGCATCGACCTACAA
CTCCACGAACATCTACAAAGACATGGCGTCGATTATCTACAATTTTCCTTCCGCTGGATG
AACAATCTACTAACACGTGAAATACCTCTTCCTTGCACCATTCGACTATGGGACACATAT
TTGGCTGAATCAGATGGATTCGCGACATTTCAGCTTTATGTCTGCGCCGCCTTTCTGCTA
CACTGGAGGGAACGACTCATGTTGGAAAAAGACTTCCAAGGTCTCATGATCCTATTACAA
AACGTCCCGACCCAGAACTGGTCGGATTCCAATATAAGTCTACTGGTAGCTGAAGCCTAC
AGGCTCAAGTTCGCGTTCGCTGACGCACCCAACCATTTGCACAATGCCGGGAAATCCGAT
AGATGA
Protein sequence:
MESHQAEHDKNGLVAETFWRTPQRAVPGRPCQRIQQNKVMSGSSYQQFQASVNDAWDLGD
DDIISGIAETKISKAISQTAAINVINSHRKSTKNVNNDVKVNEGVKPMEEVVAVRKNEIR
KIGGVPGGSSGLRHYPGRPRPVKLSALTSREESSESKLERFQQVLESAVLDLNELKQLSW
SGIPTKARAVTWRLLAGYLPANAERRAETLERKRADYKHLVRQYYDADREEDTYRQIHID
IPRMSPLVALFQQITVQVMFERILYIWAIRHPASGYVQGINDLVTPFFMVFLQEAAPGKE
LDNFPLDSLTEEQRNIIEADSFWCLSKFLDSIQDNYIFAQLGIQYKVNQLKELIRRIDLQ
LHEHLQRHGVDYLQFSFRWMNNLLTREIPLPCTIRLWDTYLAESDGFATFQLYVCAAFLL
HWRERLMLEKDFQGLMILLQNVPTQNWSDSNISLLVAEAYRLKFAFADAPNHLHNAGKSD
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