| New model in OGS2.0 | DPOGS207148 |
|---|---|
| Genomic Position | scaffold1:+ 3705048-3720368 |
| See gene structure | |
| CDS Length | 1710 |
| Paired RNAseq reads | 515 |
| Single RNAseq reads | 1782 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000584 (4e-07) |
| Best Drosophila hit | peptidoglycan recognition protein LC, isoform E (7e-22) |
| Best Human hit | peptidoglycan recognition protein 1 precursor (9e-20) |
| Best NR hit (blastp) | peptidoglycan recognition protein-lc [Culex quinquefasciatus] (2e-21) |
| Best NR hit (blastx) | peptidoglycan recognition protein-lc [Culex quinquefasciatus] (2e-20) |
| GeneOntology terms | GO:0005515 protein binding GO:0008745 N-acetylmuramoyl-L-alanine amidase activity GO:0009253 peptidoglycan catabolic process GO:0016019 peptidoglycan receptor activity GO:0016045 detection of bacterium GO:0042834 peptidoglycan binding GO:0050830 defense response to Gram-positive bacterium |
| InterPro families | IPR002502 N-acetylmuramoyl-L-alanine amidase domain IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria IPR015510 Peptidoglycan recognition protein |
| Orthology group | MCL23527 |
Nucleotide sequence:
ATGTGGAGAAGCAGGGAGGATACGGGACAGACGGTTGCACAGAGTAGGGTCCCCGCGGAG
TTGTCCGTGATAGACGAAAGTGCAATCGCCTCGGCCATACCCTCACCCGCGGTCGCCAAC
CTCAATATAAGCAAGTCTTCCAAGGTCCACATCGGTCCCAAGTTCGTCTCCGTCACTCAA
AATGTACAAAATGCTGAAACTCTTAAAGGCCGTTTCTTGGGCCTCGAATTGGTATCAACC
AAACAGGCGCGGAGGTTGCGTTGCAGCGTCGCAGTATTTGTATGTTGGGCGCTTGTAGTA
GCCTCCGCGCTTGTCATCTATCTCGTCTATGTGGCGTTGCCAAACCAACAATTTCGTCTT
GATATAGGTCTAAATGAAACGTGGTACTTACGTCGGGGTGACTGGCAAGCGATGAATCCT
TATAACGTACGTTTCTTGCATCTGCCTGTTCCTAAAGTCATCATTGGTCATTCAGCGGCC
AATTATTGTAACCAAAGGTACAGATGCATAGAACAGATGATCATCATCCAACAAGACCAT
TTAAGACGAGAGCTATCTGACATCGGTCCAAATTTCCTCGTCGGTGGCAACGGCTTCATT
TTTGAGGGTAGAGGCGCTAACGTCCACGGGGCTATGGTAGGCTCTCTTAACTCTAGAGCT
ATATCGATCATGTTTATGGGAAATTACATCCATGACCAGCCAGACTCGAAGCAATTTGAA
CATTTAAACGTTCTTCTGGACGTTTTGGTTAGAGAGGGCGTTCTACGACAAGATTATACG
TTGGTCGGCCATTGTCAGGTTAACTTCGATACGATCAGTCCTGGTCCCCATATAATGACC
CAGCTAGAGCTGCCCTTGCCGAAGTACCTATGGCAGGTGATAAAGAATAGTTCGCGCACG
GAGCGACTATCCTGTGCTGCAGCGCTTATCGTGTTGATTGTCTGCGTTGCCCTCATCGCC
TACTTTTCAGTTATGACGAGCAAAACTAAGGAAGAGGACAGAGATGAAGGCGTCATAAAG
ATGTTGAAGTTGTGGCTCGGGCTCGCGCTAACAGCTGATTCAAAGGCTTTATTCAGGGAT
CGCAATAGTTTTGGGATGAGACTAAAAAGGCCATCGGAGCTCTACAAACACCTAAGAGTT
TCCAAGAGATATATCCCGGGAAAATCCCATGATGACGTCGTTACATCGCTCCCAAAAGAC
AAAGATGCCCCAGAGCTAGAGTTAAGGCTTCAATTCCATAAGCAGTTAATGATAGGCGCA
CAAAGTAACACAGTGCGGTTAGGATCAAGTAAGAAGGCCCAAGATACTTACAATTTTGCG
GTTGGTAACGATGGGCGTGTGTATGAAAATCGTGGCTGGTCAGTTGAAGGCGCACATACA
CGTGGTTATAATCGATGCTCTATGGGCATCGGGTTCCTTGGTGACTACAGAGGAGAGATG
GAAAATCACGCAGTTGTAACTCCCGAACAAGAAAACCGAACTCAATTAATACTGGCAGAG
GGTGTGAAGCTCGGTTACTTGCGGCGAGATTTCCTAGTAGTAGGAGCCAAAGATATTTCT
GACTCGGCCAGTCCTGGCTCCAACCTCTACAATGCAATCCGTCGGTGGCCCAACTACGAC
CATCAAAACAGGTTCAAAGGACTTTCATGCGAACAGATTCACGAAAAGTACAAGGACACA
CCTTTATACGAAGTCCCCAAAGATATATAG
Protein sequence:
MWRSREDTGQTVAQSRVPAELSVIDESAIASAIPSPAVANLNISKSSKVHIGPKFVSVTQ
NVQNAETLKGRFLGLELVSTKQARRLRCSVAVFVCWALVVASALVIYLVYVALPNQQFRL
DIGLNETWYLRRGDWQAMNPYNVRFLHLPVPKVIIGHSAANYCNQRYRCIEQMIIIQQDH
LRRELSDIGPNFLVGGNGFIFEGRGANVHGAMVGSLNSRAISIMFMGNYIHDQPDSKQFE
HLNVLLDVLVREGVLRQDYTLVGHCQVNFDTISPGPHIMTQLELPLPKYLWQVIKNSSRT
ERLSCAAALIVLIVCVALIAYFSVMTSKTKEEDRDEGVIKMLKLWLGLALTADSKALFRD
RNSFGMRLKRPSELYKHLRVSKRYIPGKSHDDVVTSLPKDKDAPELELRLQFHKQLMIGA
QSNTVRLGSSKKAQDTYNFAVGNDGRVYENRGWSVEGAHTRGYNRCSMGIGFLGDYRGEM
ENHAVVTPEQENRTQLILAEGVKLGYLRRDFLVVGAKDISDSASPGSNLYNAIRRWPNYD
HQNRFKGLSCEQIHEKYKDTPLYEVPKDI