| New model in OGS2.0 | DPOGS204225 |
|---|---|
| Genomic Position | scaffold644:- 15580-17783 |
| See gene structure | |
| CDS Length | 1518 |
| Paired RNAseq reads | 1005 |
| Single RNAseq reads | 2730 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007583 (0.0) |
| Best Drosophila hit | ebi (0.0) |
| Best Human hit | F-box-like/WD repeat-containing protein TBL1XR1 (0.0) |
| Best NR hit (blastp) | AGAP007739-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP007739-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0005515 protein binding GO:0003714 transcription corepressor activity GO:0045449 regulation of transcription GO:0006350 transcription GO:0016568 chromatin modification GO:0010843 promoter binding GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0043161 proteasomal ubiquitin-dependent protein catabolic process GO:0045892 negative regulation of transcription, DNA-dependent |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR006594 LisH dimerisation motif IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR013720 LisH dimerisation motif, subgroup |
| Orthology group | MCL11194 |
Nucleotide sequence:
ATGAGTTTTTCCATTGATGAAGTGAATTTTCTCGTGTATCGATACTTACAGGAGTCCGGA
TTCCATCATTCAGCTTATACATTTGGAATTGAATCACATATATCCCAAAGCAATATAAAT
GGAGCCTTAGTTCCGCCGGCAGCATTGTTAAATATTCTGCAGAAGGGTTTGCAATATACC
GAAGCCGAAATAACTATAGGAGAAGATGGAACTGAAACACGTCTTACAGAGAGCCTGAGT
TTAATTGATGCTGTAACTCCGGATATTGTTTCCACTCGTCAAAATGCTCATAATGCTCAA
AAGCAAGCTAATAAAGAACCAGGGTCTGGTGGAGAACAAAACGGAGTTGATGGAACAGCA
TGTAGTGCAGCATCAACTACAGGAGGTACAGTAACACCAAATGTACCAGAAAATATGGAT
GTTGATCAATCAATCGAAATACCAGCAAGCAAGGCGACAGTACTACGAGGACATGAATCT
GAAGTGTTTATTTGCGCTTGGAATCCAAGCACTGATTTATTGGCTAGTGGCTCAGGAGAT
AGTACTGCTCGAATATGGGACATGTCAGACAATCCAGCAACTACCCCTAATCAGCTTATA
TTAAGACATTGTATTCAAAAAGGTGGAGCTGAGGTGCCCAGCAATAAAGATGTTACCTCA
TTGGATTGGAATTGTGATGGTAACTTATTGGCAACTGGATCATATGATGGCTATGCAAGA
ATCTGGACAACTGATGGCACATTAGCATCTACCTTGGGACAGCACAAAGGTCCTATATTT
GCACTTAAGTGGAATAAGAGGGGAAATTATATCTTAAGTGCAGGGGTTGACAAGACAACA
ATTATATGGGATGCAGCATCAGGCCAATGCACTCAACAGTTTTCTTTCCATGCAGCACCA
GCTCTTGATGTTGATTGGCAAACAAACAACTCATTTGCTTCATGTTCAACTGACCAATGT
ATTCATGTTTGCAGATTACATGTTGACAAACCAATAAAAAGTTTCAAGGGACATACGAAT
GAAGTCAATGCAATAAAATGGGACCCACAAGGACAACTCCTTGCATCATGTTCAGATGAC
ATGACATTAAAAATATGGTCCATGAAACAAGACACATGGGTTCATGACCTGAAGGCACAT
TTGAAAGAAATATACACCATAAAGTGGTCTCCTACTGGTCCTGGAACACAAAATCCTAAT
ATGAATTTGATCTTAGCCAGTGCATCATTTGATTCTACGGTGCGCTTATGGGACGTGGAA
AGAGGAGTTTGTATTCATACTCTAACTAAACATACTGAACCAGTTTACAGTGTAGCATTC
TCTCCCGACGGAAAATTTTTAGCCAGTGGCTCCTTTGACAAGTGTGTTCACATTTGGTCT
ACGCAGACAGGTGGGCTGGTACATTCTTATAAAGGGACGGGTGGCATTTTTGAAGTATGC
TGGAATTCAAGAGGTACAAAAGTAGGTGCCAGTGCGAGTGATGGAAGTGTTTTTGTCCTA
GATTTACGCAAATTGTAA
Protein sequence:
MSFSIDEVNFLVYRYLQESGFHHSAYTFGIESHISQSNINGALVPPAALLNILQKGLQYT
EAEITIGEDGTETRLTESLSLIDAVTPDIVSTRQNAHNAQKQANKEPGSGGEQNGVDGTA
CSAASTTGGTVTPNVPENMDVDQSIEIPASKATVLRGHESEVFICAWNPSTDLLASGSGD
STARIWDMSDNPATTPNQLILRHCIQKGGAEVPSNKDVTSLDWNCDGNLLATGSYDGYAR
IWTTDGTLASTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCTQQFSFHAAP
ALDVDWQTNNSFASCSTDQCIHVCRLHVDKPIKSFKGHTNEVNAIKWDPQGQLLASCSDD
MTLKIWSMKQDTWVHDLKAHLKEIYTIKWSPTGPGTQNPNMNLILASASFDSTVRLWDVE
RGVCIHTLTKHTEPVYSVAFSPDGKFLASGSFDKCVHIWSTQTGGLVHSYKGTGGIFEVC
WNSRGTKVGASASDGSVFVLDLRKL